Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738105.1_202016-09-
21] 268 sequences; 12,254,298 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq12 100 3e-16
seq29 95.1 1e-14
seq11 86.0 7e-12
>seq12
Length=1022468
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||||||||| || | || |||||||| || ||||| ||||
Sbjct 61923 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 61982
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || | |||| |||||||||||||| || || || | | ||| || || | ||
Sbjct 61983 CAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 62042
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | ||||||||| |||||| || | | | | ||||||| ||||| ||
Sbjct 62043 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 62102
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | ||||||||||| || || | ||||| |||||||| |||||
Sbjct 62103 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 62150
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||||||||||||||| || ||| || ||||| || |||||||
Sbjct 61695 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 61754
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||| || | |||| || || |||||||| || || || | || || || || | ||
Sbjct 61755 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 61814
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | ||||||| | ||| |||| ||| ||| | | | |||||| ||||| |
Sbjct 61815 AATACCTTCCTTGT-CTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 61873
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | || || || || || ||||| || || || || ||||||||
Sbjct 61874 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 61922
Score = 91.5 bits (100), Expect = 2e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||||| | | ||| | ||| || ||| |||||| ||||| ||||||||||
Sbjct 62151 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 62210
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||| || | |||| |||||||||||||| || || || | || || || || | ||
Sbjct 62211 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 62270
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | ||||||| | ||| |||| | | | ||| | | | || ||| ||||| |
Sbjct 62271 GATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAA 62329
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | || |||||||| || || | ||||| || || || |||||
Sbjct 62330 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 62378
Score = 86.0 bits (94), Expect = 7e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| || || || | ||| || | || | ||| |||||||||||||||||| || |
Sbjct 61239 ACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGA 61298
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||| || | | || ||||| |||||||| || || || | || |||||||| | ||
Sbjct 61299 CAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGG 61358
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | ||||||| | ||| |||| | | | ||| | | | ||||| ||||| |
Sbjct 61359 AATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAA 61417
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | || || || || || || || ||||| ||||| ||||||||
Sbjct 61418 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 61466
>seq29
Length=875
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||||||||||||||| || ||| || ||||| || |||||||
Sbjct 440 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 499
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||| || | |||| || || |||||||| || || || | || || || || | ||
Sbjct 500 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 559
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | ||||||| | ||| |||| | | | ||| | | | ||||| ||||| |
Sbjct 560 AATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAA 618
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | || || || || || || || ||||| ||||| ||||||||
Sbjct 619 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 667
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | |||||||| || | || |||||||| || ||||| ||||
Sbjct 212 ACCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 271
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || | | || ||||| ||||||||||| || || | || ||| || || | ||
Sbjct 272 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCTGGAGG 331
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | ||||||||| |||||| || | | | | ||||||| ||||| ||
Sbjct 332 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAAGATTCAAC 391
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | || || || || || ||||| || || || || ||||||||
Sbjct 392 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 439
>seq11
Length=661914
Score = 86.0 bits (94), Expect = 7e-12
Identities = 151/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||||||| | ||| |||||||| || ||| |||||||| || ||||| ||||
Sbjct 621570 ACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGA 621629
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| | |||| || | ||||||||||| || || | || || ||||| | |||
Sbjct 621630 TAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 621689
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | |||||||| ||| || |||| | | | ||||| ||||| ||
Sbjct 621690 GATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAAC 621749
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAG 42200
|| | |||||||| || || || | ||||| || |||
Sbjct 621750 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 621789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543210980237120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |