Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738105.1_202016-09-
21] 268 sequences; 12,254,298 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq2 140 3e-28
seq15 96.9 3e-15
>seq2
Length=796122
Score = 140 bits (154), Expect = 3e-28
Identities = 448/690 (65%), Gaps = 34/690 (5%)
Strand=Plus/Minus
Query 19246 GGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGT--GTCGCGTGTTT 19303
|| || ||| |||||||||| || |||| || | ||||| |||| |||| | |||
Sbjct 378440 GGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGAGCGTTTGCAAGTCGAATCTTT 378381
Query 19304 TTTC-TGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTT-- 19360
|| | ||| | || || || |||| | |||||| || |||||| |
Sbjct 378380 CCTCCTTCAGTT---ATAGAAAAACTGGGTATTTCTCATGTTAAAGG---TTTGCTATTG 378327
Query 19361 -ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA-- 19417
| || || || ||| ||| || || |||||||| ||| | || ||| | | || |
Sbjct 378326 TACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATTGGTACAATGCTGAAT 378267
Query 19418 -CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAA 19476
| ||| | || |||||| || |||||||| ||||| || | ||| || || |||
Sbjct 378266 GCCAAAGAGCC---CAAAATCGTCAATGGTCCAGAAATTTTGAGTAAGTACGTTGGTTCT 378210
Query 19477 TCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAA-----AACGTT 19531
|| |||||||| | || ||| ||| || || |||| |||| | | || | |
Sbjct 378209 TCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAGAATATAGGGCCAAGGGT 378150
Query 19532 TAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGC 19591
||| || ||| || || ||||| || | ||||| |||| | | | ||||
Sbjct 378149 GAGG-----AATCTTCCTTACATATTATTATTTTCGATGAGCTGGATTCTGTTTTCAAGC 378095
Query 19592 AAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGT 19645
| |||||||| || || | ||| ||| |||| ||| || |||||| | |
Sbjct 378094 AGAGAGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAGTTAATCAATTGTTAG 378035
Query 19646 CAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGAC 19705
| ||| | || |||||| | || ||||||||||||| |||||||| ||||| ||| |
Sbjct 378034 CTAAAATGGATGGTGTTGATCAGTTGAATAATATTTTGGTTATTGGTATGACCAATCGTA 377975
Query 19706 TGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTA 19765
|| ||||||||||| || | || || || ||| | || ||| | | | ||||||
Sbjct 377974 AAGATTTAATAGACAGTGCTCTTTTGCGTCCAGGTAGATTTGAAGTCCAAGTTGAAATTC 377915
Query 19766 ACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGAC 19825
| |||||||||||| ||| | | ||||||| |||| || || | ||| |
Sbjct 377914 ATTTACCCGATGAAAAAGGAAGACTCCAAATTTTCGACATTCAGACGAAGAAAATGAGGG 377855
Query 19826 AAAATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACT 19885
||||||| | | | |||||||| | ||| || | || || || |||||||
Sbjct 377854 AAAATAATATGATGAGCGACGATGTTAACTTAGCTGAGTTAGCTGCATTAACAAAAAACT 377795
Query 19886 ATAGCGGCGCAGAACTTGAGGGATTAGTGA 19915
|| || || ||||||| |||||||
Sbjct 377794 TCTCTGGTGCTGAGATTGAGGGTTTAGTGA 377765
>seq15
Length=1048280
Score = 96.9 bits (106), Expect = 3e-15
Identities = 172/251 (69%), Gaps = 0/251 (0%)
Strand=Plus/Minus
Query 41103 CTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATA 41162
|| ||||| |||||| ||| | || |||| ||||| | || || || ||||||||
Sbjct 441454 CTTTCATGCTTATTGTACCAACGTTCTTGTGATATGGGGTTGGGAGTACCATTTAACATT 441395
Query 41163 GCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAA 41222
|| |||||| || | || |||||||| | ||| | | | | || |||||
Sbjct 441394 GCATCATATGCTTTGTTGACTAGAATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAG 441335
Query 41223 TTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAGAA 41282
|| |||| || || || |||| |||| |||| | | ||||| || | || | ||||
Sbjct 441334 TTCATTCATACTTTGGGGGATGCACATGTTTATAAAGACCACATTGATGCCTTGAAAGAA 441275
Query 41283 CAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAAACGCGCTGTTGAAAAC 41342
||| | || |||| || |||||||| || | ||| |||||| | | ||| || ||
Sbjct 441274 CAAATCACCAGAAATCCAAGACCATTCCCGAAACTAAAGATTAAAAGGGACGTTAAAGAC 441215
Query 41343 ATTGATGATTT 41353
|||||||||||
Sbjct 441214 ATTGATGATTT 441204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397454701809340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |