Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738115.1_202016-09-
21] 415 sequences; 12,297,656 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq12 179 7e-40
seq11 165 2e-35
seq9 161 2e-34
>seq12
Length=1056567
Score = 179 bits (198), Expect = 7e-40
Identities = 172/218 (79%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| |||| |||||||| || || ||||| ||||| || || || || || |||||||
Sbjct 58838 CAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTA 58897
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
|||||| ||||| || || | ||||||||| || || || || ||||||||||||||||
Sbjct 58898 GCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAA 58957
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
| || | ||| ||| |||||||| || | ||||| |||||||| || |||||||| |
Sbjct 58958 TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTAC 59017
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCATTATGCTATTA 68471
| || | ||||||||||| |||||||| || ||||||
Sbjct 59018 CGGTCAAAGTCTTGACGAAAATCTGCATAAT-CTATTA 59054
Score = 178 bits (196), Expect = 2e-39
Identities = 167/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||||||||| || || || ||||||||||| || ||||| | || || |||||
Sbjct 491936 CAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 491877
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| |||||||| |||||||||||
Sbjct 491876 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 491817
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || || ||||| | ||||| ||||||| ||| || ||
Sbjct 491816 TTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGT 491757
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||||| || |||||
Sbjct 491756 CTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 491724
Score = 159 bits (176), Expect = 6e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || | ||| || |||||||| ||||| || || || || || || || || |||||
Sbjct 57921 CAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATC 57980
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| ||||| ||||| || || | |||||| ||||| || ||||| |||||||||||
Sbjct 57981 TTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC 58040
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|||||| |||| ||| ||| || || ||||| | ||||| || || | ||| || ||
Sbjct 58041 TTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGT 58100
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || ||||||||||| || |||||
Sbjct 58101 CTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 58133
Score = 154 bits (170), Expect = 3e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||| || | ||| |||||||| || ||||||||||| || || || || || ||
Sbjct 58377 CAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 58436
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| | ||||| ||||| || || | ||||||||| || || || || |||||||||||
Sbjct 58437 TTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC 58496
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|||||| || | ||| ||| |||||||| || | ||||| || || | ||| || ||
Sbjct 58497 TTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACCTCTAGGGTTATAGT 58556
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || |||||||| || || |||||
Sbjct 58557 CTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 58589
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || || || ||||||||||| || || || | || || || ||
Sbjct 58605 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTC 58664
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| | |||| ||||| || || | || ||||| || || || || |||||||||||
Sbjct 58665 TTCTAGCCGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTC 58724
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| || || | ||| ||| ||||| ||||| | ||||| || || || ||||||||
Sbjct 58725 CTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGT 58784
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || | ||||| || || ||||||||
Sbjct 58785 TTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 58817
Score = 123 bits (136), Expect = 5e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||| ||| || || || || ||||||||||| || || || | || || |||||
Sbjct 58149 CAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATC 58208
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| ||||| || || || || | ||| ||||| || || || || ||||| || ||
Sbjct 58209 TTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATC 58268
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|||||| || |||||| || || ||||| | ||||| || || | ||| || ||
Sbjct 58269 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 58328
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || || |||||||| || |||||
Sbjct 58329 CTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 58361
>seq11
Length=650437
Score = 165 bits (182), Expect = 2e-35
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||| |||| ||||| || ||||||||||| || || || || || || || ||
Sbjct 623145 CAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTC 623204
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| ||||| || |||||||||||
Sbjct 623205 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 623264
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || |||||||| | ||||| |||||||| ||||||||
Sbjct 623265 TTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 623324
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | ||||| |||||
Sbjct 623325 CTTACCAGTCAAAGTCTTAACGAA 623348
>seq9
Length=445272
Score = 161 bits (178), Expect = 2e-34
Identities = 158/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || ||||| | ||||| |||||||| ||||| || || || | || || || ||
Sbjct 73963 CAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTC 73904
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| ||||| || |||||||||||
Sbjct 73903 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 73844
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||||| |||||| || || ||||| | ||||| |||||||| ||||||||
Sbjct 73843 TTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 73784
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | |||||||| ||
Sbjct 73783 CTTACCAGTCAAAGTCTTGACAAA 73760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921617619083800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |