Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738115.1_202016-09- 21] 415 sequences; 12,297,656 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq12 120 3e-22 >seq12 Length=1056567 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | |||| |||||||||||| | |||||||||||| ||||| || ||||| | Sbjct 58363 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 58422 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| | | || || || || || || || ||||||||| || ||||| ||||| Sbjct 58423 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 58482 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || |||||||| |||||| ||| | |||| |||| ||| || | | || || Sbjct 58483 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTG-TCGATGGTATCGGAAGATTCAAC 58541 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || || ||||| || || |||||||| ||||| Sbjct 58542 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 58589 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||| | ||||| || ||||| || ||||| |||||||| || ||| | | || || Sbjct 58836 CACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTC 58895 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 |||||| || || || ||||||||| || ||||| ||||| || || |||||||| Sbjct 58896 TAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTG 58955 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 |||||| ||| | ||||| ||| ||| || | | || ||||| | || | |||| Sbjct 58956 AATTTTCGACTTAACGTTGT-CGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTT 59014 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | ||||||| ||| || || ||||||||||| Sbjct 59015 TACCGGTCAAAGTCTTGACGAAAATCTGCAT 59045 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| |||||||||||||| || || ||| | | ||| ||||| || || || Sbjct 57937 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCG 57996 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTG-CTT 127035 || | ||||||| ||||| || ||||| || || ||||||| | ||| ||| || ||| Sbjct 57997 GCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGT-CTTGAATTTTTGACTT 58055 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | |||| || | ||||| | | || || || | ||| | || || || ||||| | Sbjct 58056 AACGTTG-TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTG 58114 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || ||||| ||||| Sbjct 58115 TCTTGACGAAAATTTGCAT 58133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475498333339600