Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738125.1_202016-09-
21] 84 sequences; 12,083,633 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq12 111 1e-19
seq9 82.4 5e-11
>seq12
Length=1059573
Score = 111 bits (122), Expect = 1e-19
Identities = 164/232 (71%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| || | ||||||||||||||| || |||||||| || || || ||||||||
Sbjct 58222 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 58281
Query 33202 CAAATTGAGTT----GGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257
|| | ||| ||| |||| |||||| || ||| || || | ||| || || |
Sbjct 58282 CA----GCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTG 58337
Query 33258 TGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317
|| || ||||| || || ||| ||| || | | ||| |||||| | ||
Sbjct 58338 GAGGAATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATT 58397
Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||| || || ||||| || || || || |||||||| ||||||||||||||
Sbjct 58398 CAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 58449
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| || | ||||||||| || | || || || ||||| || ||||| |||||
Sbjct 57994 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 58053
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
||| | || || | |||||| ||| ||| || || | || || |||| ||
Sbjct 58054 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 58113
Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321
|| |||||||| || |||| ||| || | | ||| |||||| | || |||
Sbjct 58114 GATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 58173
Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || ||||| || || || || |||||||| ||||||||||||||
Sbjct 58174 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 58221
Score = 86.0 bits (94), Expect = 4e-12
Identities = 158/232 (68%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200
|||| ||||| || | ||| ||||| || | || || || ||||| || ||||| || |
Sbjct 487546 CACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGG 487487
Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260
||||| | || ||||||||||| ||| ||| || || | ||| ||||| | |
Sbjct 487486 ACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 487427
Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320
| || ||||| || || ||| || || | | ||| ||||| | || ||
Sbjct 487426 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 487367
Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
| ||||| || || || || || || | ||| || |||||||||||||| ||
Sbjct 487366 CTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 487315
>seq9
Length=427672
Score = 82.4 bits (90), Expect = 5e-11
Identities = 150/220 (68%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| || | ||| || || ||||| || || |||||||| || ||||| |||||
Sbjct 70107 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 70048
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
||| | ||| ||||||||||| ||| ||| || || | ||| ||||| | ||
Sbjct 70047 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 69988
Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321
|| ||||| || || |||| || || | | ||| ||||| | || |||
Sbjct 69987 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 69928
Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAA 33361
|||| ||| || || || || || | ||| || || |||
Sbjct 69927 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 69888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318777273651432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |