Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738135.2_202016-11-
09] 1,476 sequences; 13,250,481 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq12 131 1e-25
seq9 102 7e-17
seq1280 100 2e-16
seq11 89.7 4e-13
seq567 84.2 2e-11
>seq12
Length=1047924
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|| |||||||| || || || || ||||| ||||| || |||||| ||| ||| ||
Sbjct 494120 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 494179
Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
|| || || | | | || ||||| || ||| ||||| || || | || ||
Sbjct 494180 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 494239
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730
||||| ||| | |||||||| || || |||||||||||| || |||| || |||| ||
Sbjct 494240 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 494299
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
||||| ||||| ||||||||||| ||| |||| || ||||| |||| ||
Sbjct 494300 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 494349
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || ||||| || || || || ||||||||||| || || ||| | ||
Sbjct 55534 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 55475
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| ||| | | | | ||| |||||| ||||| || || | || |||||||
Sbjct 55474 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 55415
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
||||| | |||||||| || || || | ||||| || ||| || | || || |||
Sbjct 55414 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 55355
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| ||||| ||||||||||| ||| |||| || ||||| |||| || ||
Sbjct 55354 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGTAT 55305
>seq9
Length=460171
Score = 102 bits (112), Expect = 7e-17
Identities = 157/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622
||||| || || || || ||||| ||||| || ||| ||| |||| || || |
Sbjct 74290 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 74349
Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682
| | || ||||| ||| || ||||| || || | || || ||||| ||| |
Sbjct 74350 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 74409
Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742
|||||||| || || ||||||||||| || ||| || | || || ||||||||||||
Sbjct 74410 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 74469
Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786
||||| ||| ||||| | || || ||||| |||| || || ||
Sbjct 74470 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTATCAT 74513
>seq1280
Length=1594
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| ||||| || ||| | || ||||| || || ||| || ||| ||||
Sbjct 163 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 222
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | | |||| ||||| ||||| || || | || |||||||
Sbjct 223 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 282
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| ||| | || ||||| || || ||| ||||||| || ||| || | |||||||||
Sbjct 283 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 342
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||| ||||| ||||| |||| |||| || ||||| |||| || ||
Sbjct 343 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTAT 392
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| || || ||||| |||| || || || || ||| || ||| ||||
Sbjct 391 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 450
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | | |||| ||||| || ||||| || | || ||||||
Sbjct 451 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 510
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|||||| | || ||||| || || ||| | |||||| || ||| || | || || |||
Sbjct 511 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 570
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| ||||| ||||||||||| ||| |||| || ||| | |||| || ||
Sbjct 571 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGACTGAGAGGTGGTAT 620
Score = 84.2 bits (92), Expect = 2e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 28638 AAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAA 28697
|||||| ||||| || || | || |||||||||||| | |||||||| || ||
Sbjct 19 AAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAACAGAGGTTGATCTTTGCCGGTAAG 78
Query 28698 CAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCAC 28757
|| | ||||| || ||| || | || || ||||| ||||| ||||||||||| |||
Sbjct 79 CAGCTAGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCAC 138
Query 28758 ATGGTATTAAGATTACGAGGAGGGAT 28783
|||| || ||||| |||| || ||
Sbjct 139 TTGGTGTTGAGATTGAGAGGTGGTAT 164
>seq11
Length=668927
Score = 89.7 bits (98), Expect = 4e-13
Identities = 154/224 (69%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622
|| || || || || || ||||| ||||| || ||| ||| |||| || || |
Sbjct 637535 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 637476
Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682
| | || ||||| || ||| ||||| || || | || || ||||| ||| |
Sbjct 637475 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 637416
Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742
|||||||| || || ||||||||||| || |||| | | || || ||||| |||||
Sbjct 637415 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 637356
Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786
||||| ||| | || |||| || |||||| |||| || || ||
Sbjct 637355 GAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGTATCAT 637312
>seq567
Length=1136
Score = 84.2 bits (92), Expect = 2e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 28638 AAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAA 28697
|||||| ||||| || || | || |||||||||||| | |||||||| || ||
Sbjct 19 AAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAACAGAGGTTGATCTTTGCCGGTAAG 78
Query 28698 CAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCAC 28757
|| | ||||| || ||| || | || || ||||| ||||| ||||||||||| |||
Sbjct 79 CAGCTAGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCAC 138
Query 28758 ATGGTATTAAGATTACGAGGAGGGAT 28783
|||| || ||||| |||| || ||
Sbjct 139 TTGGTGTTGAGATTGAGAGGTGGTAT 164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425397147499404
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |