Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738225.1_202016-09- 21] 123 sequences; 11,873,460 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq12 125 6e-24 seq9 95.1 1e-14 >seq12 Length=1053573 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| || ||||| |||| ||| ||| ||||||||||| || || | Sbjct 51455 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 51514 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || | | |||| |||||||| || ||||| || ||||| | ||||| || ||||| Sbjct 51515 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 51574 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||| |||||||| |||||| |||||| | | |||| | || ||| Sbjct 51575 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 51634 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | ||| || ||||| || ||||| ||||| ||||| |||||||| Sbjct 51635 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 51681 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| || |||||||| || || ||||| || ||||||||||| | Sbjct 51683 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 51742 Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | ||| | | |||| || || || || ||||| || ||||||| |||||| || |||| Sbjct 51743 AAGGTT--CTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAG 51800 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | ||| ||||||||| ||||| |||||| | | |||| || | Sbjct 51801 GGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAA 51860 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| | || || || || || |||| |||||| |||||||| ||||| Sbjct 51861 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 51909 Score = 100 bits (110), Expect = 2e-16 Identities = 165/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| || |||||||| || || ||||| || |||||||||||| | Sbjct 482194 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 482135 Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 |||| | | | || |||| ||| || || || || ||||| | |||||||| || | Sbjct 482134 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 482077 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | ||| |||||||| || || ||| || | | |||| | || | Sbjct 482076 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 482017 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343 | |||| |||||| ||||| || || | |||||| || || |||||||| ||| || Sbjct 482016 CTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTGGCT 481961 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| || |||| ||| || || ||||| || ||||||||||| | Sbjct 51227 CCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 51286 Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | ||| | | | || || ||||| || || || || ||||| | |||||| || |||| Sbjct 51287 AAGGTT--CTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAG 51344 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | ||| || || || |||||| |||||| | | |||| | || | Sbjct 51345 GGATACCTTCTTTATCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAA 51404 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| | ||| || ||||| || || ||||| || || || |||||||| Sbjct 51405 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 51453 >seq9 Length=443630 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||||||| || || ||||||| ||| || || |||||||||||||| | Sbjct 75681 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 75622 Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | ||| | | |||| |||| ||| || || || || ||||| | |||||||| || | Sbjct 75621 AAGGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 75564 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | ||| |||||||| ||| ||| ||| || | | |||| | || | Sbjct 75563 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 75504 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAA 45327 | |||| || || ||||| || |||| |||||| ||||| Sbjct 75503 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 75464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074607757583