Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738225.1_202016-09- 21] 123 sequences; 11,873,460 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5 275 6e-69 seq9 158 1e-33 seq10 138 1e-27 >seq5 Length=557613 Score = 275 bits (304), Expect = 6e-69 Identities = 1190/1857 (64%), Gaps = 56/1857 (3%) Strand=Plus/Minus Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873 ||||| | || ||||||| ||| ||||| || || || | ||| ||||||||||| Sbjct 298927 GATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCTTCAATCCCTTCTTCCATCCGTAA 298868 Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGA 36933 ||||||||||| || ||||| | || || | || ||| ||| || ||| Sbjct 298867 AAATGCATACTTGTTAGTTTACCCATAGTTGGGGCACGTAAGAATAAATTCAAAGAATGA 298808 Query 36934 CTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATC 36993 |||||| ||| | || | ||||||||||| | | ||| ||||| || || Sbjct 298807 GATTGATCAATATAGACAGAACGATCGGCTGCCATGTTAATGATAGTCTTTTGTGAAATT 298748 Query 36994 TCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGAATA 37050 |||||||| || || |||| | || | | | ||| | || | || |||||| Sbjct 298747 TCCCAAACAGTCTTGTATAAGTCCTTCAATTCTTGTGGAACATTTGGTAAGCCTTGAATG 298688 Query 37051 GAACCATTATGT---AACACAATTGTATTCTTT-ATGTCATTATTCCACATATTTCTACT 37106 || ||||| ||| | || | || | ||| || | | || ||| ||| | | Sbjct 298687 GAGCCATTTTGTGTAATCAGA----TACTGTTTCATACCCTCATCCCAAATACCTAAATC 298632 Query 37107 TATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCT 37166 | | || | || || || || || |||||||| || || || ||||| || | | Sbjct 298631 AACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGGAATTCACCGGATAAGACACGACG 298572 Query 37167 TGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGT 37226 | || |||||| ||| |||||| | | ||||||| || |||||||| ||||| Sbjct 298571 GGAGTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGT 298512 Query 37227 AGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAAT-TC 37285 |||||||||||||||||||| || | | |||||| | ||||| | | || || Sbjct 298511 GGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATC 298452 Query 37286 TCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACC-ACATATCATAT 37344 | || || || | | ||||||||| | | || ||||| || || |||||||| | Sbjct 298451 TTTTCTTAAGGTG-TCCCAATCCCACATGCC-GTAGGGTTTTTGGTCCCACATATCAAAC 298394 Query 37345 TGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTA 37404 ||||| ||||||| | || || || | | | || || || || |||| | | | Sbjct 298393 TGTAGTATACCTTGAGAAGCAGGGGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGA 298334 Query 37405 GCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTT 37464 |||||||| ||| || ||| | | ||||| ||| || ||||| || ||||| |||||| Sbjct 298333 GCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTT 298274 Query 37465 AATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAA 37524 | | ||||| || ||| |||| | | || | || || ||||| | | Sbjct 298273 AGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGA 298214 Query 37525 CCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACT 37584 || |||||||| | | | || ||||||||| || |||| ||| | || |||| || Sbjct 298213 CCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACA 298154 Query 37585 GGATAATAATTGATATCTATTATTTTATTTAGATTTT---TAAC-----TAGTATTTTC- 37635 || || ||||| ||| || | | | |||| ||| |||| ||| | |||| Sbjct 298153 GGGTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCA 298094 Query 37636 -GTAATTATTCTCAACTTGTC----GAA--CATAAATACGTTATTATTAACAAATT-TAC 37687 |||||| || | || |||| ||| | || | | | | | ||| | | Sbjct 298093 TGTAATTTTT-TGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGAATGC 298035 Query 37688 TC--AACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAA--ATTGT 37743 | || | || || | | ||||| |||||| ||||||| | || | ||| Sbjct 298034 TGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCT--GGAGCTGAGTATTCA 297977 Query 37744 ATAATCTCTGTACAG----AGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGA 37799 | ||| || |||| || || | || | || || || || ||||||| || Sbjct 297976 ACAATTTC---ACAGCATAAGTTTGAT-GACTTGATGACACCTAAGTTTTTTTGATTAGA 297921 Query 37800 TTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTC 37859 |||| | ||||||| ||| || || | | | || || || ||| ||||||| || Sbjct 297920 TTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTC 297861 Query 37860 GATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTA--AtttttttCTTTGTT 37917 | ||| || | |||||| || ||||| ||| | ||| | |||||| | Sbjct 297860 CAAAATGGAATACCATAATTTTTGGGCTTT---GATAGTCTTACCACGACCTTCTTTCT- 297805 Query 37918 TCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACAT 37977 |||| |||||| | | ||| || | || | ||||| ||| || ||| | Sbjct 297804 -CGTAGCGGGTATATAGTGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCT 297746 Query 37978 TCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCA 38037 |||| | | || | ||| ||| || ||| || || | ||| || | |||| Sbjct 297745 GATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCA 297686 Query 38038 GGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTT 38097 || | ||||| |||| || |||||| | | | | ||| || || || ||||| Sbjct 297685 GGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTC 297626 Query 38098 CTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCT 38157 || | | |||||| || |||||||| ||||||||||| | |||| | | || Sbjct 297625 CTAATATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCA 297566 Query 38158 CCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAAC 38217 || |||||||||| ||| ||||| | || ||| | | |||||||| | | | | | Sbjct 297565 CCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCGGTGTTATTGAAAACACGAATC 297506 Query 38218 ATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGT 38277 ||||| | || ||| ||||| | |||||| |||| | || |||| ||| | | || Sbjct 297505 ATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGA 297446 Query 38278 ATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTT 38337 || ||| || | || || ||||| ||| ||| || || ||||| |||| || Sbjct 297445 ATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTC 297386 Query 38338 AACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGAC 38397 || || || | || || || ||| ||| ||||| || | | | |||||| ||| Sbjct 297385 AAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGAC 297326 Query 38398 ATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTT 38457 |||||||| |||||| ||||| || || || || ||||| || || | || ||||| Sbjct 297325 ATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATATTTT 297266 Query 38458 TCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGA 38517 |||| | ||||| ||||||| || | || ||||| | ||||| || ||||| Sbjct 297265 AGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGT 297206 Query 38518 GATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGA 38577 | || ||||| | | ||||||||| | ||| | || | || | | |||| | Sbjct 297205 GCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCACTTGACCGTTGATTCTTAGTAAA 297146 Query 38578 TACGATTTTTCTAATGTTTTTATTCCAAAATAACTATA-TGAATAATCTCTATCGTA 38633 || || ||| || ||||| | ||||||||||| || |||| ||||||| || || Sbjct 297145 TAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTGAA-AATCTCTGTCATA 297090 >seq9 Length=443630 Score = 158 bits (174), Expect = 1e-33 Identities = 414/629 (66%), Gaps = 2/629 (0%) Strand=Plus/Plus Query 38006 CATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTT 38065 ||| || ||| || || | ||| || | |||||| | ||||| |||| || |||||| Sbjct 241038 CATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTC 241097 Query 38066 TGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAG 38125 | | | | ||| || || || ||||| || | | |||||| || ||||| | Sbjct 241098 TTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCTG 241157 Query 38126 CGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAA 38185 | |||||||| || | ||| | | || || ||||| || | ||| ||||| | | Sbjct 241158 CATGCCATGGCTCCAGGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCCA 241217 Query 38186 TATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGT 38245 ||| | | || ||||| | | | | |||||| | | || || || | |||| Sbjct 241218 CATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGT 241277 Query 38246 TTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCAC 38305 | |||| | ||||||| ||| | | || || || | || | || | |||| Sbjct 241278 TGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCAC 241337 Query 38306 CTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGT 38365 ||||| ||| || || | ||| |||| ||| || |||||| | |||||||| ||| || Sbjct 241338 CTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGT 241397 Query 38366 CATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAA 38425 ||||||| || | | || ||||| |||||||||||| ||| || || ||||| | Sbjct 241398 CATCCTTCATGGCAACTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGA 241457 Query 38426 ATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTA 38485 |||| || || || || || |||| || || ||||| ||||||| || | | | Sbjct 241458 ATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCA 241517 Query 38486 CATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTC 38545 || || ||||| | || || |||||||| | || | ||||| || ||| || || | Sbjct 241518 CAGATTCGATATCGCTACCATGGATACCTAGCGCCACACGCATTACCAAATGCTGAGGAC 241577 Query 38546 TTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAA 38605 |||| | || | ||| || | || | ||||| || | ||| || | ||| | Sbjct 241578 GTTCTGCCACTTCACCGTTCAGTCTTAGCAAGTACGAACGCTCCAGTGTCTTGAATCCGA 241637 Query 38606 AATAACTATA-TGAATAATCTCTATCGTA 38633 |||| |||| || | |||| |||||||| Sbjct 241638 AATACGTATACTGGA-AATCCCTATCGTA 241665 Score = 96.9 bits (106), Expect = 3e-15 Identities = 410/632 (65%), Gaps = 33/632 (5%) Strand=Plus/Plus Query 36982 TTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT--- 37038 |||||||| || ||||| || ||||| |||| || || | | | ||| | || | Sbjct 239996 TTTTGAGAGATTTCCCAGACGGTTTTGTATAATTCCTTCAATTCTTGTGGCACATTTGGT 240055 Query 37039 AAATGTTGAATAGAACCATTATGTAACACAATTG--TATTCTTT-ATGTCATTATTCCAC 37095 || ||||||||||||||| ||| |||| |||| ||| || || || ||| Sbjct 240056 AAGCCTTGAATAGAACCATTTTGTGT---AATTAGATATTGTTTCATACTATCATCCCAA 240112 Query 37096 ATATTTCTACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAG 37153 ||| | | | | || || | | || | |||||| ||||| || || || |||| Sbjct 240113 ATAC--CCAGGTCGACTAAATCACGTAGTAAATATGGATTAACAACTTGGAATTCACCAG 240170 Query 37154 ATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTA 37213 | | || | | | || || || || |||||| | | ||||||| || | Sbjct 240171 ACAGGACACGACGAGAGTACATGTTTGAGGTCACTGGTTCGAAACATTCATTATAACCAA 240230 Query 37214 ATATTTGAGATGTAGATGCAGTAGGCATTGGTGC--TATTAGAAGGCTATTTCTCAATCC 37271 ||||| || || || || || ||||||||||| || | ||| ||||| || || Sbjct 240231 GAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCCATAGTCAAAG--AGTTTCTTAACCC 240288 Query 37272 ATGTGTATTAATTCTCTTTTTTA--GTTCATTCCAATCCCATAAATCTGTTGGGTT--CT 37327 |||| || ||| |||| ||| ||| | ||||||||| | | ||| || | Sbjct 240289 ATGTTTAACAATGTCCTTTCTTAAGGTT--TCCCAATCCCACATGCCAAATGGTTTAGCG 240346 Query 37328 TTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCAT 37387 || ||||||||| |||||| |||||| ||| ||||||||| | | | | || || Sbjct 240347 TT--CCACATATCGAATTGTAAAATACCCTTAGAAGCTGGAGAACCTTCAAAAGTAGAAT 240404 Query 37388 AAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTT 37447 | || | ||| || | ||| || | ||| || | |||| || || |||| Sbjct 240405 ATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAAGAGTAGCATGGTAAATAGTTT 240464 Query 37448 CGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAG-CCCAATAAT 37506 |||| |||||| | |||| ||| |||||||| | || || | ||| | ||| | Sbjct 240465 CGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTC-CGATTCAAAGGGTAGACGCAACATC 240523 Query 37507 ATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGA- 37565 ||| | ||| ||||| ||||| ||||| | | | || |||||||| ||| |||| || Sbjct 240524 ATATAAGTATCGGCCAAGCCCTGGACACCAAGAGCAATAGGTCTATGCTTCATATTTGAA 240583 Query 37566 --TCTAGACGATTCTATCACTGGATAATAATT 37595 ||||| | || |||||||| ||||| Sbjct 240584 TTTCTAGCC---TCGGGAACTGGATAGTAATT 240612 >seq10 Length=690436 Score = 138 bits (152), Expect = 1e-27 Identities = 398/602 (66%), Gaps = 24/602 (4%) Strand=Plus/Minus Query 11621 AACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAA 11680 |||| || || ||||| || || |||||||||||||||| || | ||| || ||| Sbjct 379147 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 379088 Query 11681 AATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCA 11740 || ||||| |||||||||| |||| ||||| | ||| || || | ||||| ||||| Sbjct 379087 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 379028 Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCT-T 11796 || || || | || || | | ||||| || |||| |||||| ||| | | | | Sbjct 379027 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 378968 Query 11797 GTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC----ATTG 11852 | || || |||||| || ||||| || || ||| | || ||| | || | Sbjct 378967 GCGTCTTGA-ATCCATCTTAAAGCCCATTCGGCCTTC----TCACCGATTTCTGGGATGG 378913 Query 11853 TTTCTATAGCGTTAAATA--AATGCATTTTTTCTATATTATCTCTTACATATGTATCTAT 11910 | | || || || || | ||| || ||||| || || | | || ||||| || Sbjct 378912 TGTGAATGGCATTGAACAAGAATTCA--CTTTCTTTAGGGTCCTTGATGTAAGTATCGAT 378855 Query 11911 TAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACA 11970 || || || |||| || ||||||||||| || ||||| || || ||||||| Sbjct 378854 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 378795 Query 11971 TCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAAT 12030 |||||||| | || || || | || |||| | || || ||||| ||||| Sbjct 378794 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 378735 Query 12031 ACCATCACTAGATGCAAAAAATGCTAGTA-TATGTTTTATAAAGTATTTTTCGTCTTTAG 12089 ||| ||| || || ||||| || || | | || || || || | |||| | | | Sbjct 378734 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTG-GAAATGAAAAATCTCTCGT-TCTCG 378677 Query 12090 TTAAT----TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAA 12145 || || || | ||| |||| | ||| || || ||||| | ||||||| ||||||| Sbjct 378676 TTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAG 378617 Query 12146 AAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATA 12205 ||| || | | | || || || |||||| ||||| |||||||||||||||| | Sbjct 378616 AAAGAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTAATAGGGAAAAGA 378557 Query 12206 AC 12207 || Sbjct 378556 AC 378555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524079643120