Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738225.1_202016-09-
21] 123 sequences; 11,873,460 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq12 147 5e-30
seq9 111 4e-19
>seq12
Length=1053573
Score = 147 bits (162), Expect = 5e-30
Identities = 166/220 (75%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| |||||||| ||||| || || || ||||| ||||| ||| || |||
Sbjct 51450 CAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCTGAC 51391
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| || || ||||| || |||||||| ||||||||||| || ||
Sbjct 51390 ACTATTGACAACGTTAAGTCGAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAG 51331
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | || || || || || || || |||||||| || || |||| | || || ||| |
Sbjct 51330 AGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAAC-CTTGTCTGACTACAACAT 51272
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||| ||||| || || || || || |||||| | |||
Sbjct 51271 CCAAAAGGAATCTACTCTTCACCTGGTGTTGAGATTGAGA 51232
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || ||||| || || || ||||| ||||| ||| || |||
Sbjct 51222 CAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGAC 51163
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| || ||| ||||| ||||| ||||| || ||||| |||||||||
Sbjct 51162 ACTATTGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAA 51103
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || ||||| ||||| || |||||||| || || || | || || || |
Sbjct 51102 AGATTGATTTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATT 51043
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135
||||| || || || || || || || |||||
Sbjct 51042 CAAAAGGAGTCCACTCTTCACCTCGTCTTGAG 51011
Score = 125 bits (138), Expect = 2e-23
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||| | || || || || || ||||| || || ||| || |||
Sbjct 481971 CAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCTGAC 482030
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||||| || ||||| ||||| || || || ||||| |||
Sbjct 482031 ACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAA 482090
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || || || | |||||||| || ||| | |||| || ||| ||
Sbjct 482091 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATC 482150
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || || || | || |||||| | |||
Sbjct 482151 CAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGA 482189
>seq9
Length=443630
Score = 111 bits (122), Expect = 4e-19
Identities = 155/215 (72%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
||| || || ||| | || || || || ||||| | || || ||| || ||||| ||
Sbjct 75463 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 75522
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
|| || ||||| ||||||||| ||||| ||||| ||||| || ||||| ||| || |
Sbjct 75523 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 75582
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC-GATTATAACGTCCAAA 178107
||||| || || || || | ||||| || || || |||| | || || ||| | ||||
Sbjct 75583 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAAC-CTTGTCTGACTACAACATTCAAA 75641
Query 178108 AAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||||| || |||| | || |||||| | |||
Sbjct 75642 AAGAATCCACTTTGCACTTAGTCTTGAGATTGAGA 75676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203729302994862
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |