Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738235.1_202016-09- 21] 93 sequences; 11,788,988 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq12 118 9e-22 >seq12 Length=1045364 Score = 118 bits (130), Expect = 9e-22 Identities = 158/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 48511 CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC 48570 ||||| ||| | ||| | ||| |||||| |||||||||||||||| || || | Sbjct 60056 CCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACC 60115 Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630 ||| || |||||||||||| | | || || | || ||||| || | || |||||| Sbjct 60116 GTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTT 60175 Query 48631 GTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTT 48688 ||| ||||||| ||| | | | || |||||||||| ||| || || | |||| Sbjct 60176 GTCTTGAATTTTCGACTTAACGTTGTCG--ATGGTATCGGAAGATTCAACTTCCAATGTT 60233 Query 48689 ATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||||||||||||| | ||| || || ||||||||||| Sbjct 60234 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 60271 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 48511 CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC 48570 ||||| ||| | ||| | ||| |||||| |||||||||||||||| || || | Sbjct 59828 CCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACC 59887 Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630 ||| || |||||||||||| | | || || | ||| ||||| || | || |||||| Sbjct 59888 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 59947 Query 48631 GTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTAT 48690 |||| |||||| ||| | | || || |||| || || ||| | || || Sbjct 59948 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 60007 Query 48691 GGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||||||||||| | ||| || ||||| |||||||| Sbjct 60008 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 60043 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || | ||| || ||||| ||||| | || ||| || |||||||| ||||||| Sbjct 59588 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 59647 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || || |||| ||||| ||||||||| | | || || | || ||||| || Sbjct 59648 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 59707 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | || |||||||||| |||||| ||| | | || || |||| || || Sbjct 59708 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 59767 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || |||||||||||||| | ||| || ||||| |||||||| Sbjct 59768 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 59815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250722538093