Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738235.1_202016-09-
21] 93 sequences; 11,788,988 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq11 147 4e-30
seq12 145 1e-29
seq9 145 1e-29
seq10 120 5e-22
>seq11
Length=655691
Score = 147 bits (162), Expect = 4e-30
Identities = 167/224 (75%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || || || ||||||||||| | || || || || ||
Sbjct 615416 ATGATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAG 615475
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| |||| || || |||| |||||||| ||||||||||| || ||||| |||||||||
Sbjct 615476 TCAGATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 615535
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| || ||||| || || || ||||| || || || || |||
Sbjct 615536 GGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGAT 615595
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060
|| ||||| | ||| ||||| |||||||| || || |||| |||
Sbjct 615596 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 615639
>seq12
Length=1045364
Score = 145 bits (160), Expect = 1e-29
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| || | || || | |||||| || | ||| || ||| || || ||
Sbjct 59358 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAGTCA 59417
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | || || | ||| |||||||||||||| ||||||||||| || ||
Sbjct 59418 GACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGA 59477
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||||||||| |||||| |||| || || ||||| || || |||||
Sbjct 59478 GGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCA 59537
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| ||||| || || || || || |||| ||||| | ||| || |||||
Sbjct 59538 ACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 59587
Score = 143 bits (158), Expect = 5e-29
Identities = 175/239 (73%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || || |||| ||||| || || || ||
Sbjct 489779 TTCTTACCACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTG 489720
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || | || |||||||| ||||||||||| || ||||| ||||||
Sbjct 489719 TAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGG 489660
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || ||||| || ||||| || || || ||||| ||||| || ||
Sbjct 489659 TCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAA 489600
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| ||||| || ||||| || ||||| ||||| || || | ||| || ||||| ||
Sbjct 489599 GATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 489541
Score = 140 bits (154), Expect = 6e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || ||||| || |||| |||||| ||| ||||||||
Sbjct 59586 ATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCA 59645
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | || |||| |||| ||| ||||| ||||| || ||||| ||||| || ||
Sbjct 59646 GACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 59705
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || || || ||||| || || ||| || || || || |||||
Sbjct 59706 GGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCA 59765
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| |||| ||| ||||||||||| || || || |||| || ||||||||
Sbjct 59766 ACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 59815
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| || | || || | |||||| || | ||| || ||| || |||||
Sbjct 59814 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 59873
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | || |||| || | || ||||| ||||| || || |||||||| || ||
Sbjct 59874 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGA 59933
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || || || ||||| || || ||| || || || || |||||
Sbjct 59934 GGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCA 59993
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| |||| ||| ||||||||||| || || || |||| || ||||||||
Sbjct 59994 ACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 60043
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| || | || || | |||||| || | ||| || ||| || |||||
Sbjct 60042 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 60101
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | || |||| || | || ||||| ||||| || ||||| ||||| || ||
Sbjct 60102 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 60161
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| ||||| || || || || ||||| || |||||
Sbjct 60162 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 60221
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | || ||||||||||| || || || || | ||| ||||||||
Sbjct 60222 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 60271
>seq9
Length=440246
Score = 145 bits (160), Expect = 1e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || || ||||| || ||||| | ||||| ||| || ||
Sbjct 71722 ATGATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAG 71663
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| || || | || |||| |||||||| ||||||||||| || ||||| |||||||||
Sbjct 71662 TCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 71603
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| || ||||| || || || ||||| ||||| || || |||
Sbjct 71602 GGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGAT 71543
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054
|| ||||| | ||| ||||| |||||||| || || ||
Sbjct 71542 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTT 71505
>seq10
Length=688820
Score = 120 bits (132), Expect = 5e-22
Identities = 335/505 (66%), Gaps = 13/505 (3%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| ||||||||| | |||||||| ||||| || || || | || || ||
Sbjct 381481 TTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTT 381422
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATAA 38950
| ||| ||||| || || |||| | || || ||||| | | || | | | || ||
Sbjct 381421 TCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT-TGTTACCGAAAGCAACCAA 381363
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
| ||| ||||| || || ||||| ||||| |||||| ||| |||||||| | ||
Sbjct 381362 CAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAA 381303
Query 39011 TTTAAATGGTAATGCATCATCAATAAAT-TCttt-ttctatttctacagcttgtttaatt 39068
|| |||||| || || ||| || | ||||| ||| ||||| ||||| | | |
Sbjct 381302 AGCAACTGGTAAGGCGTC--CAAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACA 381245
Query 39069 atcataattatattattttttgataa--tttatatttaatatgattcgcatataGTAAAC 39126
|| | || | || | | | ||| | || | ||| || | | || |
Sbjct 381244 ATTTT--TTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATGG---GCGAACAACAAGC 381190
Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186
||||||| || || || ||||||||||| ||| | || ||||| || ||| ||||| |
Sbjct 381189 ATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAAC 381130
Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 39246
| ||||| | ||||||||||| | ||| || || || ||||| || || || || |
Sbjct 381129 CGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGA 381070
Query 39247 TACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAA 39306
||| || | | ||||| || | || |||| | ||||||| | | | ||| ||
Sbjct 381069 CACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGAA 381010
Query 39307 TCCAATTTATGGCCCAATCTGCTTT 39331
|||| ||| ||||| || || ||
Sbjct 381009 TCCATCTTAAAGCCCATTCGGCCTT 380985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905134947779400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |