Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738255.1_202016-09- 21] 87 sequences; 11,858,350 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq9 111 2e-19 >seq9 Length=439328 Score = 111 bits (122), Expect = 2e-19 Identities = 284/430 (66%), Gaps = 2/430 (0%) Strand=Plus/Minus Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329 ||||| || ||||| | ||||| | ||||||||||||||| || ||||| ||||| Sbjct 236790 TACTTCACTCACGCTTCCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCT 236731 Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 || ||| | || || |||||||||||||| ||||| || || || || || | || Sbjct 236730 TCATGTTTCTTAGTTGCCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAA 236671 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACGTCCGT 53449 || ||||| || ||||| | |||||| | ||| | || | ||| ||||| Sbjct 236670 GAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGT 236611 Query 53450 GCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTC 53509 | | || | ||| || || ||||| | | || | | |||||| | Sbjct 236610 TCCACAGGTTCTTATATCGCTGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATT 236551 Query 53510 CGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCG 53569 || || ||||| || || ||||| || || ||||||||||| ||| | || | Sbjct 236550 CGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCT 236491 Query 53570 TTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTG 53629 |||||| | | ||| ||||| ||||| || || || | || ||| | || | | | Sbjct 236490 TTCGCCCTTTTCCTGGAGCCATGGCATGCAGATATCTTTGATTTTATTGATATTAGGAAG 236431 Query 53630 AATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACAGCTCTGTGGATTCCGGA 53688 || || ||| | || || || || ||| | || |||| | ||||| |||||||| || Sbjct 236430 AACCACGGTAAAGAGGAAATTCG-TGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGA 236372 Query 53689 CCTCTTCATG 53698 || |||||| Sbjct 236371 TCTTTTCATG 236362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215404902600