Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738255.1_202016-09-
21] 87 sequences; 11,858,350 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq12 116 9e-21
seq11 100 7e-16
>seq12
Length=1004462
Score = 116 bits (128), Expect = 9e-21
Identities = 153/211 (73%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || |||||||| || |||||||||||||| |||| |||||||| |||||||| |
Sbjct 453256 CAAG-TGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCA 453198
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || || ||||| | || || ||||| | | || |||||||| ||||| |
Sbjct 453197 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGA 453138
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | |||| ||| || ||||| || |||||||| || |
Sbjct 453137 TCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTAC 453078
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || | |||||| ||||| | ||||| ||
Sbjct 453077 CGGTTAAAGTCTTGACGAAAATTTGCATCTT 453047
Score = 113 bits (124), Expect = 1e-19
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954
||| || |||||||| ||||| ||||| || ||||| || | | ||||| ||||||||
Sbjct 51241 GACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 51300
Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
||| ||| ||||| || || | || |||||||| | | || |||||||| |||||
Sbjct 51301 TAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 51360
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
||||||| || || | || | |||| ||| || || || || || ||||| ||
Sbjct 51361 AATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTT 51420
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| ||||| | |||||
Sbjct 51421 ACCTGTCAGTGTCTTGACGAAAATTTGCAT 51450
Score = 111 bits (122), Expect = 4e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|| || ||||||||||| || |||||||||||||| || | || ||||| |||||||||
Sbjct 51470 ACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCT 51529
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
|| || || || || || | ||||| || |||| | ||| ||||| || ||||||
Sbjct 51530 AGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGA 51589
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
||||| || || | || | |||| ||| || || || || || ||||| ||
Sbjct 51590 ATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTC 51649
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || ||||| | |||||
Sbjct 51650 CCTGTTAGAGTTTTGACGAAAATTTGCAT 51678
Score = 111 bits (122), Expect = 4e-19
Identities = 150/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||||||||| || |||||||||||||| || | || ||||| || |||||||
Sbjct 51928 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTA 51986
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||| ||||| | |||||| || || | | ||| |||||||| || || |
Sbjct 51987 GCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGA 52046
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
|||| || || | || | |||| || || || || | ||| || ||||| |
Sbjct 52047 TTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTAC 52106
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || | |||||| || |||| ||||||
Sbjct 52107 CGGTCAAAGTCTTAACAAAGATCTGCAT 52134
Score = 105 bits (116), Expect = 2e-17
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| || || || |||||||| | || ||||| || || ||||||||||| | | |||
Sbjct 52142 CTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTT 52201
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || |||||||| || ||||| ||||| | || || || || | | ||| |||
Sbjct 52202 CTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCT 52261
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| ||||||||||| || || | || | | | || ||| || ||||| |
Sbjct 52262 TCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAAT 52321
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || || | |||||| ||||| | ||||||
Sbjct 52322 GTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 52362
>seq11
Length=644980
Score = 100 bits (110), Expect = 7e-16
Identities = 147/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| | ||| | ||| | ||| || || |||||||||||||| || | || |||||| ||
Sbjct 604105 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 604164
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
||||| | || || || ||||| | || || ||||| | | ||| ||||||||
Sbjct 604165 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 604224
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
||||| || || |||||| | || | | |||| ||| || ||||| | ||| ||
Sbjct 604225 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 604284
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
|| || || || | |||||| ||||||
Sbjct 604285 GGTCTTACCAGTCAAAGTCTTAACGAAG 604312
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153819513850377
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |