Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738265.1_202016-09- 21] 117 sequences; 11,889,758 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5 178 4e-39 seq9 159 1e-33 seq13 131 5e-25 seq4 102 2e-16 seq15 84.2 6e-11 >seq5 Length=559748 Score = 178 bits (196), Expect = 4e-39 Identities = 481/732 (66%), Gaps = 12/732 (2%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 |||||| ||||| |||||||| | ||| || ||||||| ||||| || || || || Sbjct 299362 GTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATT 299303 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 |||||| |||||||||||||||||||| | || | | || || || || || | || || Sbjct 299302 AGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGC 299243 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG--CCTTCC 155807 |||| ||| ||| | | |||| |||| | || || | ||||| Sbjct 299242 TTCCAAAATGGAATACCATAATTTTTGGGC-----TTTGATAGTCTTACCACGACCTTCT 299188 Query 155808 GACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG- 155866 ||| || |||| || | | || |||||||||||||| || | ||||| Sbjct 299187 TTCTCGTAGCGGGTATATAGTGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGA 299128 Query 155867 GCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATAC 155926 || | | || | | || | | ||| | ||| | ||||||| ||| || | Sbjct 299127 GCTGATGTTGGAG-AGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAG 299069 Query 155927 ATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATT 155986 |||| ||| | |||| ||| | || ||||| ||||| | ||||| || Sbjct 299068 ATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT 299009 Query 155987 CTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAA 156046 ||||| | || | || || ||||||| ||| ||| ||||| || | ||||| Sbjct 299008 CTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAA 298949 Query 156047 ACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACC 156103 |||| || || |||||||| || ||||| || || || |||||||| |||| Sbjct 298948 CGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCGGTGTTATTGAAAACACG 298889 Query 156104 TAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGA 156163 | ||||||||| | ||| || ||||| || || || || ||| | ||||||| ||| Sbjct 298888 AATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGA 298829 Query 156164 GCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTC 156223 |||| ||||| |||||||| ||||||||||| | ||| ||||| ||| ||||| Sbjct 298828 ACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTC 298769 Query 156224 CTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGA 156283 ||| | || | | |||| || || ||||| || || | ||| | | | | || || Sbjct 298768 CTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGA 298709 Query 156284 ACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA 156343 | ||||||| ||| || || || ||||| | || || | || ||| ||||||| Sbjct 298708 GGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATA 298649 Query 156344 CTTATTAGACAT 156355 || |||||| Sbjct 298648 TTTTAGAGACAT 298637 >seq9 Length=430996 Score = 159 bits (176), Expect = 1e-33 Identities = 504/771 (65%), Gaps = 19/771 (2%) Strand=Plus/Plus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646 ||||||| || | |||||| || ||||| || | | | ||||| || || |||| Sbjct 227525 CAATAGAAGCTAAATTACAAACTGCAGTTTCATCCGGGGAGGAATATTCGACGATTTCAC 227584 Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706 | || | |||||| ||||| || ||||| |||| ||||| | || |||||||| | Sbjct 227585 AACATAAGTTAGATGATTTGATAGTACCTAAGTTCTGTTGGTTTGTCTTCCTGTTACATG 227644 Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766 | ||||| || | ||| | || || ||||| || ||||||| | || ||| || Sbjct 227645 CGTCCTTATAAACCATGAAAGGTGTACCTGTTTCTGTCTGTGCTTGCAAAATGGCATACC 227704 Query 155767 AGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG--CCTTCCGACTCATATTTCATATA 155824 | | | |||| |||||| ||| || | ||||| || || |||| Sbjct 227705 ACAACTTTTGGGCTTTAATT-----GTTTTACCACGACCTTCTCTTTCGTAACGAGTATA 227759 Query 155825 CAGCGTTCGGTAA--TCCTCACCGTAACAATCA-CTCAGTCCAGGGCACTTATCGGGGCA 155881 || ||| || || ||||| | |||| || | | ||||| | || | | Sbjct 227760 TAG--TTCTTCAAATTCATCACCCCACACATCATCTAAACCTGGGGCAGCACTGGGTG-A 227816 Query 155882 AAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAAT 155941 ||| | | ||| | ||| | ||||||| ||| || | |||| ||| | Sbjct 227817 AAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAG 227876 Query 155942 AGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAA 156001 |||| ||| | || ||||| ||||| | ||||| ||||||| | || | Sbjct 227877 AGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAAT 227936 Query 156002 GAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTT 156061 || || ||||| | ||| ||||||||| | | || ||| |||| ||||| Sbjct 227937 AAAATCAAAGATATCTGCATGCCATGGCTCCAGGAAAAGGGCGAAAGCACCAGGTCTCTT 227996 Query 156062 G---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAAT 156118 | |||||||| || ||||| || ||||| |||||||| |||| | ||||||||| | Sbjct 227997 GTTACCACCCTGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAA 228056 Query 156119 ACCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTATGAA 156177 || || ||||| || ||||| || |||| ||| ||||| | || || | || | | Sbjct 228057 CCCGTTTGAAGTACCGTTGGTACCAGCGA-TATAAGAACCTGTGGAACGGATGTTGTTGA 228115 Query 156178 TATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGA 156237 |||| || |||| |||||||| ||| ||||| ||| ||||| || | ||||| Sbjct 228116 TATGAAGACCAACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCAT 228175 Query 156238 AAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTC 156297 |||||||||| ||||| ||||| | ||| | | || | || ||| | |||||| Sbjct 228176 AAATACCTTCGATAGAGTCATCCTTCATGGCAACTAAGAAACATGAAGACATTTGAGGAT 228235 Query 156298 GTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA-CTTA 156347 |||| || ||||||||||||| || || | || ||| | || || |||| Sbjct 228236 GTGGCGTACCAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTA 228286 >seq13 Length=896270 Score = 131 bits (144), Expect = 5e-25 Identities = 256/378 (68%), Gaps = 3/378 (1%) Strand=Plus/Plus Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908 ||| ||||| ||||||| | ||||||| || | ||||||| ||| || || | Sbjct 416685 CCTGTCAAATCTACCAGGCCTTAATAATGCTTTATCGAGAATATCGGGTCTATTGGTACC 416744 Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968 || || ||||||| || | | | | || |||||||| | ||| |||||||| Sbjct 416745 AGCTAAAACAACAACGTGGTCAGCTGGAGTGAAACCATCCATTTCTACTAACATTTGATT 416804 Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028 || || | || || |||||||| | |||| ||| |||| | || |||| Sbjct 416805 TAGCGTGTTCTCTCTCTCATCATTGGCACCTGAAAAATTACCCTTTTGTCTTGCTTTT-- 416862 Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 || | |||||||||||||||||| || | | | || | ||||| ||| ||| || Sbjct 416863 -CCTATAGCATCAATTTCGTCAATAAACACAATTGAGGGTGCATTTTCTCTTGCAGTTTT 416921 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 || || |||||||| | | ||| |||| ||||||| |||||||||||||||| ||| | Sbjct 416922 GAACAAATCTCTTACTCTTGCTGCACCAACACCAACAAACATTTCTACAAATTCTGAACC 416981 Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 || || | || | ||| ||||| |||||| |||| | || || | || || Sbjct 416982 AGAAACAAAATAAAACGGAACACCGGCTTCACCTGCTGTTGCCTTTGCAAGCAAAGTTTT 417041 Query 289209 ACCTGTTCCAGGTGGTCC 289226 ||| || || ||||| || Sbjct 417042 ACCGGTACCTGGTGGACC 417059 >seq4 Length=1489212 Score = 102 bits (112), Expect = 2e-16 Identities = 135/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 |||||| ||| |||| ||| || ||| || ||||| | | || | ||||||||| Sbjct 208854 TTTCTTGTGGTGTTATCGTAATGAACCATGATATCTTCTAGAGCTTTCACTAAACGACGT 208913 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 ||||||||||| ||| | |||||| || || ||||| || ||||| ||||||||||| Sbjct 208914 TGAATATAACCTGTTTCGGCTGTTTTGACGGCGGTATCGATAAGACCTTCACGACCACCC 208973 Query 302659 ATAGCATGGAAGAATAGCTCT--TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGA 302716 || |||||||| || | ||| | |||| | || | ||| | | ||| ||||||| | Sbjct 208974 ATTGCATGGAAAAAAAATTCTTGTGGGGTC-AAACCTCTCAA-ATATGAGTTCTCAACAA 209031 Query 302717 AACC 302720 |||| Sbjct 209032 AACC 209035 Score = 86.0 bits (94), Expect = 2e-11 Identities = 131/186 (70%), Gaps = 3/186 (2%) Strand=Plus/Plus Query 301767 TAAATAAATAGTACAGGATGGATTCTTTGTGTTTTCCGATAGAGACAGAATTTCTTCAAT 301826 ||| || | ||| |||| || | || |||||| || | | || |||||| | | Sbjct 208067 TAAGTATACAGTCAAGGAAGGGGTTTTCATGTTTTTCGCCACATTCAAAATTTCCTTTAA 208126 Query 301827 ACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAAAGTATT 301886 |||||| |||||| || || || ||||| |||||||||||||| ||||| || || Sbjct 208127 ACGGGGGACACCAGAAGTAACTTTT---TTGGAAGCAACACCAGCAAAATGGAAGGTGTT 208183 Query 301887 CAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAACCATTTC 301946 || || | ||| || | ||| |||||||| ||| || || | | |||||||||||| Sbjct 208184 AAGGGTCATTTGTGTGGCTGGTTCACCAATGGATTGGGCTGCTAGAACACCAACCATTTC 208243 Query 301947 TCCTGG 301952 || || Sbjct 208244 ACCAGG 208249 >seq15 Length=1060075 Score = 84.2 bits (92), Expect = 6e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||||| | |||||||||| ||||||||||| || || || || | || || | Sbjct 600009 TGGGCAACAGTCATACGAGATGGAATAGCATGAGGGTTAATAATCAAATCTGGAACAATA 600068 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957 || || || || || |||||||| || || | ||| || | |||||||| |||||||| Sbjct 600069 CCTTCTGCGGTAAATGGCATATC-TTCTCTACGATATGTGATACCAATAGTACCCTTTTG 600127 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||||||||| || || |||||||| Sbjct 600128 ACCGTGACGAGAAGCAAATTTGTCACCAAT 600157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815393653429