Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738265.1_202016-09-
21] 117 sequences; 11,889,758 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq12 168 8e-37
seq9 132 5e-26
seq5 129 7e-25
seq11 118 1e-21
>seq12
Length=1047060
Score = 168 bits (186), Expect = 8e-37
Identities = 165/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| || || || |||||||| || || |||||||| || |
Sbjct 59146 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 59087
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || | ||| | |||||||| |||||||| || |||||||||||||||
Sbjct 59086 GACACTATTGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 59027
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | |||||||| ||||| ||||| || |||| | | || || | ||||| |||
Sbjct 59026 CAAAGATTGATTTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 58967
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| |||||||| ||||||||||| || ||||||
Sbjct 58966 ATTCAAAAGGAGTCCACTCTTCACCTCGTCTTG 58934
Score = 145 bits (160), Expect = 9e-30
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || || || || |||||||| || || |||||||| || |
Sbjct 59374 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCT 59315
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || | ||| | |||||||| || || || || || ||||| || ||
Sbjct 59314 GACACTATTGACAACGTTAAGTCGAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 59255
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | |||||||||||||||||||| || |||| | | ||| | | ||||| ||
Sbjct 59254 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 59195
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||| |||||||| || || |||
Sbjct 59194 ATCCAAAAGGAATCTACTCTTCACCTGGTGTTG 59162
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| | ||||| ||||||||||| || || ||||| || |
Sbjct 488853 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCT 488912
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| | || || || |||||||| || ||||| || |||||
Sbjct 488913 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 488972
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||||||| | || |||| | | || | | ||||| ||
Sbjct 488973 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 489032
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||| ||||| || | ||||||
Sbjct 489033 ATCCAAAAGGAATCTACTCTACACTTGGTCTTG 489065
Score = 123 bits (136), Expect = 3e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||||||||| || || || |||||||| || || |||||||| || |
Sbjct 59602 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 59543
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || | ||| | |||||||| |||||||| || ||||||||||| ||
Sbjct 59542 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 59483
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||| ||||||||||| || || | | | || || | || |||||
Sbjct 59482 CAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 59423
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| || || || || || | ||| | || |||
Sbjct 59422 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTG 59390
Score = 123 bits (136), Expect = 3e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| | ||||| || || || ||| | |||||||| ||
Sbjct 59830 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 59771
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | ||||| ||||||||||| || || |||||||| ||
Sbjct 59770 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 59711
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || ||||| |||||||| || || || | | | ||| | | ||||| ||
Sbjct 59710 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 59651
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
||||||||||||| ||||||||
Sbjct 59650 ATCCAAAAGGAATCTACTCTTCA 59628
>seq9
Length=430996
Score = 132 bits (146), Expect = 5e-26
Identities = 345/521 (66%), Gaps = 15/521 (3%)
Strand=Plus/Plus
Query 81223 TCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCG 81281
|| ||| |||||||||| ||||| ||||| || || | ||||| || | ||| ||
Sbjct 227842 TCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCA-CG 227900
Query 81282 CGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCA 81341
||||| | ||| ||||| | | || | ||| || | ||| || ||||||||
Sbjct 227901 AATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCTGCATGCCA 227960
Query 81342 TGGCTCCAGATACACGGCGATCGACCC------CTTGCGACGGCCACCCTGGTTGACGTA 81395
||||||||| | | ||||| | || |||| || ||||||||| || ||
Sbjct 227961 TGGCTCCAGGAAAAGGGCGAAAGCACCAGGTCTCTTGTTAC---CACCCTGGTCCACATA 228017
Query 81396 ACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGT 81455
||||||||| || || ||||| | |||||| || | || | ||| |||||| ||
Sbjct 228018 ACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGT 228077
Query 81456 ACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGA 81515
||| ||||| || || ||| || | ||| |||| |||||| | |||||||
Sbjct 228078 ACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTG- 228136
Query 81516 CCACTTT--GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCT 81573
|| ||| |||||| |||||| |||| || |||||||| || ||||| ||
Sbjct 228137 -CAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCA 228195
Query 81574 TTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAAC 81633
| |||||| ||| |||||||| ||||| ||||| | | || || |||||
Sbjct 228196 TCCTTCATGGCAACTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGAAT 228255
Query 81634 AGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACG 81693
| ||||||| |||||| |||| || | ||||||| | ||| || | | ||
Sbjct 228256 AAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCACA 228315
Query 81694 CGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCAT 81734
| |||||| ||| || ||||| | || ||||||||
Sbjct 228316 GATTCGATATCGCTACCATGGATACCTAGCGCCACACGCAT 228356
Score = 111 bits (122), Expect = 2e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
||||||||||| | || || ||||| || ||| | || ||||| || ||| | |||
Sbjct 62258 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 62317
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || ||||| |||||||| || || || || ||||| || | |
Sbjct 62318 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 62377
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||||||||||||| | || || | | | ||| | | ||||| || | |||||
Sbjct 62378 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 62437
Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618
||||||||| | || ||||||||
Sbjct 62438 GAATCCACTTTGCACTTAGTCTTG 62461
>seq5
Length=559748
Score = 129 bits (142), Expect = 7e-25
Identities = 320/476 (67%), Gaps = 21/476 (4%)
Strand=Plus/Minus
Query 81223 TCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCG 81281
|| ||| |||||||||| ||||| ||||| || || | ||||| || | ||| ||
Sbjct 299088 TCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCA-CG 299030
Query 81282 CGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCA 81341
||||| | ||| ||||| | | || | ||| || | ||| || ||||||||
Sbjct 299029 AATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCA 298970
Query 81342 TGGCTCCAGATACACGGCGATCGACCC----CTTGCGACGGCCACCCTGGTTGACGTAAC 81397
||| ||||| || | ||| | || || ||| | |||||||||| || ||||
Sbjct 298969 TGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTT-ATTACCACCCTGGTCAACATAAC 298911
Query 81398 GGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTAC 81457
|||| || || || ||||| | |||||| || | ||| | || |||||| ||||
Sbjct 298910 GGGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTAC 298851
Query 81458 CCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACC 81517
| | || || || | | || | || ||| ||||| || ||||| | |
Sbjct 298850 CAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAG--C 298793
Query 81518 ACTTT--GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTT 81575
| ||| |||||| |||||| |||| ||| || ||||| |||||||| || |
Sbjct 298792 AGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTC 298733
Query 81576 TTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAAC 81633
|||||| ||| ||||||||| ||||| ||||| |||| ||| ||||||||||||
Sbjct 298732 CTTCATGGCAACCAAGAAACAAGAGGACATTTGAGG--TTTTGGAGTACCGGCATTGAAC 298675
Query 81634 AGTGTTGGGGTCGCGTGAATGAAATAACGGTTT---GACATCAGGTCATAGGTTTC 81686
| ||||| | |||||| | ||||| ||| ||||||| || ||| |||||
Sbjct 298674 AACGTTGGAGAGGCGTGAGTAAAATA---TTTTAGAGACATCAAGTTATACGTTTC 298622
>seq11
Length=657412
Score = 118 bits (130), Expect = 1e-21
Identities = 160/223 (72%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 27396 TATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGT 27455
|||| | || || | | ||| || ||||| | || || ||||| || ||| | || ||
Sbjct 616636 TATTCCAATTTTGTACAGCTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGT 616577
Query 27456 TGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCC 27515
||| || ||| | ||||| ||| | ||| | || || || |||||||| || || ||
Sbjct 616576 TGAATCTTCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCC 616517
Query 27516 TCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGC 27575
|| ||||| || | | || ||||||||||||||| | || || | | | || ||| |
Sbjct 616516 ACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATC 616457
Query 27576 AGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||| || ||||||||||||||||| | ||| | ||||||
Sbjct 616456 TGACTACAACATCCAAAAGGAATCCACTTTACATTTGGTCTTG 616414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309565921040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |