Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738345.1_202016-09- 21] 85 sequences; 11,947,238 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5 280 1e-70 seq9 163 3e-35 seq10 138 1e-27 >seq5 Length=550285 Score = 280 bits (310), Expect = 1e-70 Identities = 1191/1857 (64%), Gaps = 56/1857 (3%) Strand=Plus/Minus Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873 ||||| | || ||||||| ||| ||||| || || || | ||| ||||||||||| Sbjct 294295 GATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCTTCAATCCCTTCTTCCATCCGTAA 294236 Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGA 36933 ||||||||||| || ||||| | || || | || ||| ||| || ||| Sbjct 294235 AAATGCATACTTGTTAGTTTACCCATAGTTGGGGCACGTAAGAATAAATTCAAAGAATGA 294176 Query 36934 CTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATC 36993 |||||| ||| | || | ||||||||||| | | ||| ||||| || || Sbjct 294175 GATTGATCAATATAGACAGAACGATCGGCTGCCATGTTAATGATAGTCTTTTGTGAAATT 294116 Query 36994 TCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGAATA 37050 |||||||| || || |||| | || | | | ||| | || | || |||||| Sbjct 294115 TCCCAAACAGTCTTGTATAAGTCCTTCAATTCTTGTGGAACATTTGGTAAGCCTTGAATG 294056 Query 37051 GAACCATTATGT---AACACAATTGTATTCTTT-ATGTCATTATTCCACATATTTCTACT 37106 || ||||| ||| | || | || | ||| || | | || ||| ||| | | Sbjct 294055 GAGCCATTTTGTGTAATCAGA----TACTGTTTCATACCCTCATCCCAAATACCTAAATC 294000 Query 37107 TATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCT 37166 | | || | || || || || || |||||||| || || || ||||| || | | Sbjct 293999 AACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGGAATTCACCGGATAAGACACGACG 293940 Query 37167 TGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGT 37226 | || |||||| ||| |||||| | | ||||||| || |||||||| ||||| Sbjct 293939 GGAGTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGT 293880 Query 37227 AGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAAT-TC 37285 |||||||||||||||||||| || | | |||||| | ||||| | | || || Sbjct 293879 GGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATC 293820 Query 37286 TCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACC-ACATATCATAT 37344 | || || || | | ||||||||| | | || ||||| || || |||||||| | Sbjct 293819 TTTTCTTAAGGTG-TCCCAATCCCACATGCC-GTAGGGTTTTTGGTCCCACATATCAAAC 293762 Query 37345 TGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTA 37404 ||||| ||||||| | || ||||| | | | || || || || |||| | | | Sbjct 293761 TGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGA 293702 Query 37405 GCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTT 37464 |||||||| ||| || ||| | | ||||| ||| || ||||| || ||||| |||||| Sbjct 293701 GCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATGGTTTCAAAGATTTGGATATTT 293642 Query 37465 AATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAA 37524 | | ||||| || ||| |||| | | || | || || ||||| | | Sbjct 293641 AGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGA 293582 Query 37525 CCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACT 37584 || |||||||| | | | || ||||||||| || |||| ||| | || |||| || Sbjct 293581 CCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACA 293522 Query 37585 GGATAATAATTGATATCTATTATTTTATTTAGATTTT---TAAC-----TAGTATTTTC- 37635 || || ||||| ||| || | | | |||| ||| |||| ||| | |||| Sbjct 293521 GGGTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCA 293462 Query 37636 -GTAATTATTCTCAACTTGTC----GAA--CATAAATACGTTATTATTAACAAATT-TAC 37687 |||||| || | || |||| ||| | || | | | | | ||| | | Sbjct 293461 TGTAATTTTT-TGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGAATGC 293403 Query 37688 TC--AACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAA--ATTGT 37743 | || | || || | | ||||| |||||| ||||||| | || | ||| Sbjct 293402 TGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCT--GGAGCTGAGTATTCA 293345 Query 37744 ATAATCTCTGTACAG----AGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGA 37799 | ||| || |||| || || | || | || || || || ||||||| || Sbjct 293344 ACAATTTC---ACAGCATAAGTTTGAT-GACTTGATGACACCTAAGTTTTTTTGATTAGA 293289 Query 37800 TTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTC 37859 |||| | ||||||| ||| || || | | | || || || ||| ||||||| || Sbjct 293288 TTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTC 293229 Query 37860 GATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTA--AtttttttCTTTGTT 37917 | ||| || | |||||| || ||||| ||| | ||| | |||||| | Sbjct 293228 CAAAATGGAATACCATAATTTTTGGGCTTT---GATAGTCTTACCACGACCTTCTTTCT- 293173 Query 37918 TCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACAT 37977 |||| |||||| | | ||| || | || | ||||| ||| || ||| | Sbjct 293172 -CGTAGCGGGTATATAGTGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCT 293114 Query 37978 TCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCA 38037 |||| | | || | ||| ||| || ||| || || | ||| || | |||| Sbjct 293113 GATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCA 293054 Query 38038 GGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTT 38097 || | ||||| |||| || |||||| | | | | ||| || || || ||||| Sbjct 293053 GGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTC 292994 Query 38098 CTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCT 38157 || | | |||||| || |||||||| ||||||||||| | |||| | | || Sbjct 292993 CTAATATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCA 292934 Query 38158 CCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAAC 38217 || |||||||||| ||| ||||| | || ||| | | |||||||| | | | | | Sbjct 292933 CCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCGGTGTTATTGAAAACACGAATC 292874 Query 38218 ATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGT 38277 ||||| | || ||| ||||| | |||||| |||| | || |||| ||| | | || Sbjct 292873 ATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGA 292814 Query 38278 ATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTT 38337 || ||| || | || || ||||| ||| ||| || || ||||| |||| || Sbjct 292813 ATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTC 292754 Query 38338 AACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGAC 38397 || || || | || || || ||| ||| ||||| || | | | |||||| ||| Sbjct 292753 AAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGAC 292694 Query 38398 ATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTT 38457 |||||||| |||||| ||||| || || || || ||||| || || | || ||||| Sbjct 292693 ATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATATTTT 292634 Query 38458 TCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGA 38517 |||| | ||||| ||||||| || | || ||||| | ||||| || ||||| Sbjct 292633 AGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGT 292574 Query 38518 GATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGA 38577 | || ||||| | | ||||||||| | ||| | || | || | | |||| | Sbjct 292573 GCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCACTTGACCGTTGATTCTTAGTAAA 292514 Query 38578 TACGATTTTTCTAATGTTTTTATTCCAAAATAACTATA-TGAATAATCTCTATCGTA 38633 || || ||| || ||||| | ||||||||||| || |||| ||||||| || || Sbjct 292513 TAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTGAA-AATCTCTGTCATA 292458 >seq9 Length=382020 Score = 163 bits (180), Expect = 3e-35 Identities = 415/629 (66%), Gaps = 2/629 (0%) Strand=Plus/Plus Query 38006 CATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTT 38065 ||| || ||| || || | ||| || | |||||| | ||||| |||| || |||||| Sbjct 233291 CATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTC 233350 Query 38066 TGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAG 38125 | | | | ||| || || || ||||| || | | |||||| || ||||| | Sbjct 233351 TTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCTG 233410 Query 38126 CGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAA 38185 | |||||||| || | ||| | | || || ||||| || | ||| ||||| | | Sbjct 233411 CATGCCATGGCTCCAGGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCCA 233470 Query 38186 TATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGT 38245 ||| | | || ||||| | | | | |||||| | | || || || | |||| Sbjct 233471 CATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGT 233530 Query 38246 TTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCAC 38305 | |||| | ||||||| ||| | | || || || | || | || | |||| Sbjct 233531 TGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCAC 233590 Query 38306 CTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGT 38365 ||||| ||| || || | ||| |||| ||| || |||||| | |||||||| ||| || Sbjct 233591 CTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGT 233650 Query 38366 CATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAA 38425 ||||||| || | | || ||||| |||||||||||| ||| || || ||||| | Sbjct 233651 CATCCTTCATGGCAACTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGA 233710 Query 38426 ATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTA 38485 |||| || || || || || |||| || || ||||| ||||||| || || | | Sbjct 233711 ATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTCCAGCA 233770 Query 38486 CATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTC 38545 || || ||||| | || || |||||||| | || | ||||| || ||| || || | Sbjct 233771 CAGATTCGATATCGCTACCATGGATACCTAGCGCCACACGCATTACCAAATGCTGAGGAC 233830 Query 38546 TTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAA 38605 |||| | || | ||| || | || | ||||| || | ||| || | ||| | Sbjct 233831 GTTCTGCCACTTCACCGTTCAGTCTTAGCAAGTACGAACGCTCCAGTGTCTTGAATCCGA 233890 Query 38606 AATAACTATA-TGAATAATCTCTATCGTA 38633 |||| |||| || | |||| |||||||| Sbjct 233891 AATACGTATACTGGA-AATCCCTATCGTA 233918 Score = 93.3 bits (102), Expect = 4e-14 Identities = 409/632 (65%), Gaps = 33/632 (5%) Strand=Plus/Plus Query 36982 TTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT--- 37038 |||||||| || ||||| || ||||| |||| || || | | | ||| | || | Sbjct 232249 TTTTGAGAGATTTCCCAGACGGTTTTGTATAATTCCTTCAATTCTTGTGGCACATTTGGT 232308 Query 37039 AAATGTTGAATAGAACCATTATGTAACACAATTG--TATTCTTT-ATGTCATTATTCCAC 37095 || ||||||||||||||| ||| |||| |||| ||| || || || ||| Sbjct 232309 AAGCCTTGAATAGAACCATTTTGTGT---AATTAGATATTGTTTCATACTATCATCCCAA 232365 Query 37096 ATATTTCTACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAG 37153 ||| | | | | || || | | || | |||||| ||||| || || || |||| Sbjct 232366 ATAC--CCAGGTCGACTAAGTCACGTAGTAAATATGGATTAACAACTTGGAATTCACCAG 232423 Query 37154 ATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTA 37213 | | || | | | || || || || |||||| | | ||||||| || | Sbjct 232424 ACAGGACACGACGAGAGTACATGTTTGAGGTCACTGGTTCGAAACATTCATTATAACCAA 232483 Query 37214 ATATTTGAGATGTAGATGCAGTAGGCATTGGTGC--TATTAGAAGGCTATTTCTCAATCC 37271 ||||| || || || || || ||||||||||| || | ||| ||||| || || Sbjct 232484 GAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCCATAGTCAAAG--AGTTTCTTAACCC 232541 Query 37272 ATGTGTATTAATTCTCTTTTTTA--GTTCATTCCAATCCCATAAATCTGTTGGGTT--CT 37327 |||| || ||| |||| ||| ||| | ||||||||| | | ||| || | Sbjct 232542 ATGTTTAACAATGTCCTTTCTTAAGGTT--TCCCAATCCCACATGCCAAATGGTTTAGCG 232599 Query 37328 TTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCAT 37387 || ||||||||| |||||| |||||| || ||||||||| | | | | || || Sbjct 232600 TT--CCACATATCGAATTGTAAAATACCCTTGGAAGCTGGAGAACCTTCAAAAGTAGAAT 232657 Query 37388 AAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTT 37447 | || | ||| || | ||| || | ||| || | |||| || || |||| Sbjct 232658 ATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAAGAGTAGCATGGTAAATAGTTT 232717 Query 37448 CGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAG-CCCAATAAT 37506 |||| |||||| | |||| ||| |||||||| | || || | ||| | ||| | Sbjct 232718 CGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTC-CGATTCAAAGGGTAGACGCAACATC 232776 Query 37507 ATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGA- 37565 ||| | ||| ||||| ||||| ||||| | | | || |||||||| ||| |||| || Sbjct 232777 ATATAAGTATCGGCCAAGCCCTGGACACCAAGAGCAATAGGTCTATGCTTCATATTTGAA 232836 Query 37566 --TCTAGACGATTCTATCACTGGATAATAATT 37595 ||||| | || |||||||| ||||| Sbjct 232837 TTTCTAGCC---TCGGGAACTGGATAGTAATT 232865 >seq10 Length=685177 Score = 138 bits (152), Expect = 1e-27 Identities = 398/602 (66%), Gaps = 24/602 (4%) Strand=Plus/Minus Query 11621 AACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAA 11680 |||| || || ||||| || || |||||||||||||||| || | ||| || ||| Sbjct 376471 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 376412 Query 11681 AATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCA 11740 || ||||| |||||||||| |||| ||||| | ||| || || | ||||| ||||| Sbjct 376411 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 376352 Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCT-T 11796 || || || | || || | | ||||| || |||| |||||| ||| | | | | Sbjct 376351 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 376292 Query 11797 GTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC----ATTG 11852 | || || |||||| || ||||| || || ||| | || ||| | || | Sbjct 376291 GCGTCTTGA-ATCCATCTTAAAGCCCATTCGGCCTTC----TCACCGATTTCTGGGATGG 376237 Query 11853 TTTCTATAGCGTTAAATA--AATGCATTTTTTCTATATTATCTCTTACATATGTATCTAT 11910 | | || || || || | ||| || ||||| || || | | || ||||| || Sbjct 376236 TGTGAATGGCATTGAACAAGAATTCA--CTTTCTTTAGGGTCCTTGATGTAAGTATCGAT 376179 Query 11911 TAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACA 11970 || || || |||| || ||||||||||| || ||||| || || ||||||| Sbjct 376178 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 376119 Query 11971 TCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAAT 12030 |||||||| | || || || | || |||| | || || ||||| ||||| Sbjct 376118 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 376059 Query 12031 ACCATCACTAGATGCAAAAAATGCTAGTA-TATGTTTTATAAAGTATTTTTCGTCTTTAG 12089 ||| ||| || || ||||| || || | | || || || || | |||| | | | Sbjct 376058 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTG-GAAATGAAAAATCTCTCGT-TCTCG 376001 Query 12090 TTAAT----TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAA 12145 || || || | ||| |||| | ||| || || ||||| | ||||||| ||||||| Sbjct 376000 TTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAG 375941 Query 12146 AAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATA 12205 ||| || | | | || || || |||||| ||||| |||||||||||||||| | Sbjct 375940 AAAGAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTAATAGGGAAAAGA 375881 Query 12206 AC 12207 || Sbjct 375880 AC 375879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524302192400