Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738355.1_202016-09-
21] 89 sequences; 12,068,392 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq12 159 5e-34
seq11 111 2e-19
seq9 107 3e-18
>seq12
Length=1038465
Score = 159 bits (176), Expect = 5e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || ||| |||| || || ||||| || |||| || ||| ||||
Sbjct 49806 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 49747
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||||| || ||||| ||||| || ||||| || |||||||| |||
Sbjct 49746 GACACTATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 49687
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| |||||||||||| || ||||| ||||| | || ||||||||
Sbjct 49686 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 49627
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| |||||| | ||| | ||||| ||||| ||||| ||||| |||
Sbjct 49626 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGT 49579
Score = 149 bits (164), Expect = 9e-31
Identities = 172/230 (75%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| | || || || ||||| || |||| || ||| |||
Sbjct 49578 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 49519
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||||| |||| ||| || |||||||||||||| || ||||| || |||
Sbjct 49518 GACACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 49459
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| |||||||||| ||| |||||||| || |||||| ||||| || || || || |
Sbjct 49458 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACA-- 49401
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| || | || ||||| || ||||| ||||| ||||| |||
Sbjct 49400 ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 49351
Score = 140 bits (154), Expect = 5e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || ||| |||| || || ||||| || |||| || ||| ||||
Sbjct 49350 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 49291
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||||| || ||||| ||||| || ||||| || |||||||| ||
Sbjct 49290 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 49231
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| |||||||||||| || |||||| ||||| | || || || |||
Sbjct 49230 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 49171
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || ||| ||| | || ||||| | || || || || || || |||
Sbjct 49170 AT-TCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGT 49123
Score = 134 bits (148), Expect = 2e-26
Identities = 176/243 (72%), Gaps = 2/243 (1%)
Strand=Plus/Minus
Query 155810 TTTATGTAATAAA--ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTA 155867
|||| ||||| | ||||| || || | || || ||||| || ||||| || |||||
Sbjct 50277 TTTAACTAATAGATTATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTG 50218
Query 155868 GAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGC 155927
||||| ||| ||| |||| || ||||| || ||||| ||||| || |||||
Sbjct 50217 GAAGTTGAATCTTCCGATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGT 50158
Query 155928 ATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACT 155987
|| |||||||| |||||||||||||| | ||||||||||||||| ||||| |||||
Sbjct 50157 ATCCCTCCAGATCAACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACG 50098
Query 155988 TTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGC 156047
| || ||||| || || || ||| | || | ||| | ||| |||| |||||||
Sbjct 50097 CTGTCTGATTACAACATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGT 50038
Query 156048 GGT 156050
|||
Sbjct 50037 GGT 50035
Score = 125 bits (138), Expect = 1e-23
Identities = 167/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| |||| || ||||| || ||||| || || ||||| || ||| ||
Sbjct 50034 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 49975
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || ||||| || || || ||||| || |||||||| |||
Sbjct 49974 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 49915
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || ||||| | ||||||||||||||| ||||| ||||| || || || || |
Sbjct 49914 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACA-- 49857
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| || | || ||||| || ||||| ||||| ||||| |||
Sbjct 49856 ACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 49807
Score = 120 bits (132), Expect = 4e-22
Identities = 168/234 (72%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || | || || || || || || |||||||| | ||||| ||| |
Sbjct 478684 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 478743
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||| | |||| || || || || || ||||| || ||||| || || || ||
Sbjct 478744 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 478803
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| |||||||| | |||||| |||||||| || || ||
Sbjct 478804 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 478863
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| || | || || || || || || ||||| ||||| ||||
Sbjct 478864 A--ACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGTG 478915
>seq11
Length=655656
Score = 111 bits (122), Expect = 2e-19
Identities = 156/217 (72%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895
|||| || |||||||| || || || || || ||||| ||| |||||| | ||| |
Sbjct 615205 TTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACA 615146
Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955
| || || || || ||||| || ||||| || || || || |||||||||||||| |
Sbjct 615145 ATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 615086
Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GA 156013
||| |||||||| | ||||| |||||| |||| || || || || ||||| ||
Sbjct 615085 TTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACAT--CCAAAAGGA 615028
Query 156014 GGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| || | ||||| || || ||||||||||| |||
Sbjct 615027 ATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGT 614991
>seq9
Length=423220
Score = 107 bits (118), Expect = 3e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891
||| | || || |||||||| || || || || || ||||| ||| |||||| | ||||
Sbjct 61718 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 61777
Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951
|| || || || || ||||| || ||||| || || || || ||||||||||||
Sbjct 61778 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 61837
Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011
|| | ||| |||||||| | ||||| ||||| || || || || || || |||
Sbjct 61838 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 61897
Query 156012 GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| | || | || ||||| || ||||| ||||| |||
Sbjct 61898 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGT 61936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871185792400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |