Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738355.1_202016-09-
21] 89 sequences; 12,068,392 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq12 98.7 9e-16
>seq12
Length=1038465
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979
||||| | | ||||| || ||||||||||| || || || | ||||| |||||
Sbjct 50059 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 50118
Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039
||||||| | |||| | | |||||||||||||| || ||||| || || ||||||
Sbjct 50119 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTT 50178
Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099
|| | | || | ||||||| | || ||||| | || | |||||||| ||
Sbjct 50179 CGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGT 50238
Query 132100 CAGAGTTTTTATGAAAATCTGCATGACTTATTAG 132133
|| ||| || | |||||||||||| | ||||||
Sbjct 50239 CAAAGTCTTGACGAAAATCTGCATAATCTATTAG 50272
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
||| | ||| ||||| || | | || || ||||| ||||||||||| || ||| |
Sbjct 49360 CAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCT 49419
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
|||||| || || ||||| | | | || | | ||||||||| ||||| || |||||
Sbjct 49420 ACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTC 49479
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
|||||| ||| || ||| | | || | ||| |||| | || || || | ||
Sbjct 49480 TTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGT 49539
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| || || || || |||||||| | |||||| |||||
Sbjct 49540 TATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 49578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610669770040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |