Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738375.1_202016-09- 21] 115 sequences; 11,860,629 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq68 116 3e-21 seq12 104 2e-17 seq9 100 2e-16 >seq68 Length=914 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || || || ||| | || || | || || || || | Sbjct 229 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 288 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || || || ||||| ||||| || ||||| |||||| Sbjct 289 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 348 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||| | | ||| |||||||| ||||| | |||| | ||||||||| Sbjct 349 CAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 408 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| ||||| | ||||| ||||| ||||||||||| || Sbjct 409 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 455 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| |||| || || | || ||| | || || || | | Sbjct 457 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 516 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | |||||| || ||| || |||||||| || ||||| |||||| Sbjct 517 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 576 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||||| | || |||||||| ||||||| |||| | | || || ||| Sbjct 577 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 636 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || || || || | ||| | ||| |||| | ||||| || Sbjct 637 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 683 >seq12 Length=1042684 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || || || ||| | || || | || || || || | Sbjct 59833 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 59774 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || || || ||||| ||||| || ||||| |||||| Sbjct 59773 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 59714 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | | ||| ||||| || ||||| | |||| | | || || ||| Sbjct 59713 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 59654 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| |||||||| |||| | ||||| ||||||||||| || Sbjct 59653 ATCCAAAAGGAATCTACTCTTCACCTGGTGTTGAGATTGAGAGGTGG 59607 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| |||||| | || || || || ||||| || || | |||||| | ||||| || | Sbjct 488543 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATC 488602 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 ||||| || || | ||||| ||||| ||||| ||||| || || || || Sbjct 488603 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 488662 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||||| ||| |||| | | || |||||| | ||||||| |||| | ||| || Sbjct 488663 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 488722 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| |||||||| | || || || || ||||||||||| || Sbjct 488723 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 488773 >seq9 Length=439995 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 ||||| || || || ||||| || | || || | ||||| || | ||||| || Sbjct 70574 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 70633 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | ||||| ||||||| ||||| ||||| || || || || ||||| ||| || Sbjct 70634 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 70693 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | | || |||||| | ||||| | |||| | | || || |||||||||||| Sbjct 70694 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 70753 Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || | || ||||| || ||||||||||| || Sbjct 70754 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 70791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935397417825