Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738375.1_202016-09- 21] 115 sequences; 11,860,629 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq12 178 2e-39 seq68 174 3e-38 seq11 165 2e-35 seq9 161 2e-34 >seq12 Length=1042684 Score = 178 bits (196), Expect = 2e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||||||||| || || || ||||||||||| || ||||| | || || ||||| Sbjct 488759 CAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 488700 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| |||||||| ||||||||||| Sbjct 488699 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 488640 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | |||||| || || ||||| | ||||| ||||||| ||| || || Sbjct 488639 TTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGT 488580 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||||| || ||||| Sbjct 488579 CTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 488547 Score = 174 bits (192), Expect = 3e-38 Identities = 171/218 (78%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| |||| ||||| || || || ||||| ||||| || || || || || ||||||| Sbjct 59854 CAAGATGTAAGGTGGATTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTA 59913 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| ||||| || || | ||||||||| || || || || |||||||||||||||| Sbjct 59914 GCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAA 59973 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | || | ||| ||| |||||||| || | ||||| |||||||| || |||||||| | Sbjct 59974 TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTAC 60033 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCATTATGCTATTA 68471 | || | ||||||||||| |||||||| || |||||| Sbjct 60034 CGGTCAAAGTCTTGACGAAAATCTGCATAAT-CTATTA 60070 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || | ||| || |||||||| ||||| || || || || || || || || ||||| Sbjct 59144 CAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATC 59203 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| || || ||||| || || | |||||| ||||| || ||||| ||||||||||| Sbjct 59204 TTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC 59263 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 |||||| |||| ||| ||| || || ||||| | ||||| || || | ||| || || Sbjct 59264 TTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGT 59323 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || ||||||||||| || ||||| Sbjct 59324 CTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 59356 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || | ||| || |||||||| ||||| || || || || || || || || ||||| Sbjct 59393 CAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATC 59452 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| || || ||||| || || | |||||| ||||| || ||||| ||||||||||| Sbjct 59453 TTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC 59512 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 |||||| |||| ||| ||| || || ||||| | ||||| || || | ||| || || Sbjct 59513 TTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGT 59572 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || ||||||||||| || ||||| Sbjct 59573 CTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 59605 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||| ||| || || || || ||||||||||| || || || | || || || || Sbjct 59621 CAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTC 59680 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| |||||| ||||| || || | || ||||| || || || || ||||||||||| Sbjct 59681 TTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTC 59740 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || || || | ||| ||| ||||| ||||| | ||||| || || || |||||||| Sbjct 59741 CTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGT 59800 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || | ||||| || || |||||||| Sbjct 59801 TTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 59833 >seq68 Length=914 Score = 174 bits (192), Expect = 3e-38 Identities = 164/208 (79%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| |||| |||||||| || || ||||| ||||| || || || || || ||||||| Sbjct 208 CAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTA 149 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| ||||| || || | ||||||||| || || || || |||||||||||||||| Sbjct 148 GCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAA 89 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | || | ||| ||| |||||||| || | ||||| |||||||| || |||||||| | Sbjct 88 TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTAC 29 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | ||||||||||| |||||||| Sbjct 28 CGGTCAAAGTCTTGACGAAAATCTGCAT 1 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| || | ||| |||||||| || ||||||||||| || || || || || || Sbjct 441 CAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 382 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| | ||||| ||||| || || | ||||||||| || || || || ||||||||||| Sbjct 381 TTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC 322 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || || || | ||| ||| ||||| ||||| | ||||| || || || |||||||| Sbjct 321 CTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGT 262 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || | ||||| || || |||||||| Sbjct 261 TTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 229 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || | ||| || |||||||| ||||| || || || || || || || || ||||| Sbjct 897 CAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATC 838 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| || || ||||| || || | |||||| ||||| || ||||| ||||||||||| Sbjct 837 TTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC 778 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 |||||| |||| ||| ||| || || ||||| | ||||| || || | ||| || || Sbjct 777 TTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGT 718 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || ||||||||||| || ||||| Sbjct 717 CTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 685 >seq11 Length=657312 Score = 165 bits (182), Expect = 2e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| |||| ||||| || ||||||||||| || || || || || || || || Sbjct 616595 CAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTC 616654 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| ||||| || ||||||||||| Sbjct 616655 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 616714 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | |||||| || |||||||| | ||||| |||||||| |||||||| Sbjct 616715 TTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 616774 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | ||||| ||||| Sbjct 616775 CTTACCAGTCAAAGTCTTAACGAA 616798 >seq9 Length=439995 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| | ||||| |||||||| ||||| || || || | || || || || Sbjct 70777 CAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTC 70718 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| ||||| || ||||||||||| Sbjct 70717 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 70658 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||||| |||||| || || ||||| | ||||| |||||||| |||||||| Sbjct 70657 TTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 70598 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | |||||||| || Sbjct 70597 CTTACCAGTCAAAGTCTTGACAAA 70574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621075167800