Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738375.1_202016-09- 21] 115 sequences; 11,860,629 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5 163 3e-35 seq9 125 8e-24 >seq5 Length=553118 Score = 163 bits (180), Expect = 3e-35 Identities = 786/1240 (63%), Gaps = 25/1240 (2%) Strand=Plus/Minus Query 109918 TCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTAC 109977 ||||||||||| || |||| ||| | || ||||||||| || | |||| | ||||| Sbjct 294306 TCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTAT 294247 Query 109978 GACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCA 110037 | || || || || | || | ||||| || | | |||||||| ||||| ||| Sbjct 294246 GGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCA 294187 Query 110038 AAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATA 110097 || || || ||| | | || | || ||| | || || || | || | || || Sbjct 294186 AAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATG 294127 Query 110098 AACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGT 110157 || || || ||||| |||||||| | | |||| || | ||| |||| || || | Sbjct 294126 AAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTT 294067 Query 110158 CGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACA 110217 | || ||| || ||||| | || || || ||||| | || | ||| || ||| Sbjct 294066 CTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATTACGAGTGACA 294007 Query 110218 GTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCT------CCTTA--- 110268 || | |||||||| | ||| | | | | | | || |||| ||| | Sbjct 294006 ACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAA 293947 Query 110269 -TTGACATATTTG--GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTG 110325 || || || || | |||| || || | || || |||| ||| || ||| Sbjct 293946 GTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGA 293887 Query 110326 TCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTC 110385 | | |||||| | |||||| || ||||| || ||| |||||||| ||||| || Sbjct 293886 GCTGAGTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTT 293827 Query 110386 TGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTC 110445 ||||| ||||| ||| || |||||||| || | | | | || ||||||||||| || Sbjct 293826 TGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTT 293767 Query 110446 TGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCT 110505 || | | | ||||| | ||||| | ||| || ||| ||| | ||||| Sbjct 293766 TGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGATAGTC---TTACCACGACCT 293710 Query 110506 TCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCC 110565 || | |||||| ||| || | ||||||| || | ||||| ||| | ||| Sbjct 293709 TCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCA 293650 Query 110566 TTCGCCT-TGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAA 110624 || ||| || | |||| | | ||| | ||| || || || | ||||||||| Sbjct 293649 GGAGCTGATGTTGG-AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAA 293591 Query 110625 CAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTG 110684 || ||||||||||| | || | ||| | || | |||| || || | ||| || Sbjct 293590 AAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTG 293531 Query 110685 GTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGC 110744 ||| | | || | ||| || | |||||| | ||||||||||| || || | || Sbjct 293530 GTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTAAAGGGC 293471 Query 110745 GATGGATCC----CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGA 110800 | | || ||| | ||| |||||| |||||| || || ||| |||||| | Sbjct 293470 AAACGCACCAGGTCTT-TTATTACCACCCTGGTCAACATAACGGGCGGTGTTATTGAAAA 293412 Query 110801 CCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTAT 110860 | | | ||||||||| | || | || ||| |||||||| ||| || | Sbjct 293411 CACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAG 293352 Query 110861 TGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC 110920 | | |||||||| |||||||| | |||||||||||| || || ||| |||| Sbjct 293351 TTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCAC 293292 Query 110921 ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGC 110980 | || | | || | ||||| || || || || || |||| |||||| | || | Sbjct 293291 ATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAAC 293232 Query 110981 AAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGA 111040 |||| ||||| ||||| || || || |||||||| | || || | || ||| | | Sbjct 293231 AAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-A 293173 Query 111041 ACAGACCTT-GGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGA 111099 | | | || | |||||| ||| || || || | || | | |||| ||||||| Sbjct 293172 AAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGG 293113 Query 111100 ATACCAATGGCAACTCGCATGAACATATATTGAGG-CGTT 111138 || || | || |||| ||| | | || ||| || |||| Sbjct 293112 ATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTT 293073 >seq9 Length=439995 Score = 125 bits (138), Expect = 8e-24 Identities = 493/769 (64%), Gaps = 16/769 (2%) Strand=Plus/Plus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 || || |||||||| || | ||| || || | ||| || || | || ||||| | Sbjct 235598 GGTAGGGCAATAGAAGCTAAATTACAAACTGCAGTTTCATCCGGGGAGGAATATTCGACG 235657 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 ||||| ||| ||||| || || || ||| ||||||| || || | || | Sbjct 235658 ATTTCACAACATAAGTTAGATGATTTGATAGTACCTAAGTTCTGTTGGTTTGTCTTCCTG 235717 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTG-AGAAT 110459 || ||||| |||||||| | |||| | || ||||| ||||| ||||||| |||| | ||| Sbjct 235718 TTACATGCGTCCTTATAAACCATGAAAGGTGTACCTGTTTCTGTCTGTG-CTTGCAAAAT 235776 Query 110460 GGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519 ||| | ||| | | ||| | ||| ||| | ||||||| ||||| Sbjct 235777 GGCATACCACAACTTTTGGGCTTTAATTGTT---TTACCACGACCTTCTCTTTCGTAACG 235833 Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGG 110579 || || | || |||||||| | || |||||||| | ||| || ||| Sbjct 235834 AGTATATAGTTCTTCAAATTCATCACCCCACACATCATCTAAACCTGGGGCAGCACTGGG 235893 Query 110580 ACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCA 110639 | || | | ||| | ||| || || || | ||||||||| || ||||||||||| Sbjct 235894 TGAAAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCA 235953 Query 110640 CATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTC 110699 | || | ||| | || | |||| || || | ||| ||||| | | || Sbjct 235954 TAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATC 236013 Query 110700 CAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATA------GACAGCGATGGATCC 110753 | ||| || | |||||| | |||||||| || || | || ||| | || Sbjct 236014 AATAAAATCAAAGATATCTGCATGCCATGGCTCCAGGAAAAGGGCGAAAGCACCAGGTCT 236073 Query 110754 CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGG 110813 ||| || || |||||| ||||| || || || |||||| || | | |||||| Sbjct 236074 CTTGTTACCAC---CCTGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGG 236130 Query 110814 AATAATTCCATCGGATTGACCATTTGTACC-CCTAATTCTGGACTTATTGGCACGAATGT 110872 ||| | || | || ||| || ||||| | | | | || | ||| ||| |||| Sbjct 236131 AATCAACCCGTTTGAAGTACCGTTGGTACCAGCGATATAAGAACCT-GTGGAACGGATGT 236189 Query 110873 CGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTG 110932 || |||||| | ||||| |||||| || || ||| ||||| ||| | | | Sbjct 236190 TGTTGATATGAAGACCAACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAG 236249 Query 110933 TACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCT 110992 || |||||||||| || || || || |||| |||||| || || || |||||||| | Sbjct 236250 TATCATAAATACCTTCGATAGAGTCATCCTTCATGGCAACTAAGAAACATGAAGACATTT 236309 Query 110993 GAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAA 111041 ||||| | ||||| || || ||||| | || || | || ||| |||| Sbjct 236310 GAGGATGTGGCGTACCAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAA 236358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975153347000