Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738375.1_202016-09- 21] 115 sequences; 11,860,629 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq9 91.5 1e-13 seq68 89.7 5e-13 seq12 89.7 5e-13 >seq9 Length=439995 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| || | ||| ||||| || | || ||||||||||| |||||||| || | Sbjct 70791 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 70732 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || |||||| | ||| ||||||||| |||||| | ||| || || || || Sbjct 70731 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 70672 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| ||| ||| || | | || | ||||| | | ||| ||| Sbjct 70671 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 70612 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 137402 || | ||| | ||||| || ||||| || || || || Sbjct 70611 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 70574 >seq68 Length=914 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 137209 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 137268 |||| || || || ||||| || ||||| || || || || ||||| |||||| Sbjct 887 TGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGT 828 Query 137269 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 137328 ||||| ||| | |||| | |||||| || ||||| || ||||| ||||| ||||||| Sbjct 827 TTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTT 768 Query 137329 TGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 137388 || | | || | ||||| | | ||| || || | || | ||||| || ||| Sbjct 767 GACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTC 708 Query 137389 AATGTTTTTACGAATATTTGCATA 137412 | ||| || ||||| ||||||||| Sbjct 707 AGTGTCTTGACGAAAATTTGCATA 684 >seq12 Length=1042684 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 137209 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 137268 |||| || || || ||||| || ||||| || || || || ||||| |||||| Sbjct 59154 TGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGT 59213 Query 137269 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 137328 ||||| ||| | |||| | |||||| || ||||| || ||||| ||||| ||||||| Sbjct 59214 TTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTT 59273 Query 137329 TGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 137388 || | | || | ||||| | | ||| || || | || | ||||| || ||| Sbjct 59274 GACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTC 59333 Query 137389 AATGTTTTTACGAATATTTGCATA 137412 | ||| || ||||| ||||||||| Sbjct 59334 AGTGTCTTGACGAAAATTTGCATA 59357 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 137209 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 137268 |||| || || || ||||| || ||||| || || || || ||||| |||||| Sbjct 59403 TGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGT 59462 Query 137269 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 137328 ||||| ||| | |||| | |||||| || ||||| || ||||| ||||| ||||||| Sbjct 59463 TTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTT 59522 Query 137329 TGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 137388 || | | || | ||||| | | ||| || || | || | ||||| || ||| Sbjct 59523 GACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTC 59582 Query 137389 AATGTTTTTACGAATATTTGCATA 137412 | ||| || ||||| ||||||||| Sbjct 59583 AGTGTCTTGACGAAAATTTGCATA 59606 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || ||||| || || ||||||||||| || || || |||||| || || ||||| Sbjct 59865 GTGGATTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 59924 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| |||||| | ||| ||||| ||||| || ||||| ||||| |||||| || Sbjct 59925 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 59984 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | || || | | ||| ||||| | || | || || |||||||| || Sbjct 59985 ACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 60044 Query 137395 TTTACGAATATTTGCATA 137412 || ||||| || |||||| Sbjct 60045 TTGACGAAAATCTGCATA 60062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543297718000