Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738375.1_202016-09- 21] 115 sequences; 11,860,629 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq68 168 8e-37 seq12 168 8e-37 seq9 132 5e-26 seq5 129 7e-25 seq11 118 1e-21 >seq68 Length=914 Score = 168 bits (186), Expect = 8e-37 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| || || || |||||||| || || |||||||| || | Sbjct 685 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 744 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | |||||||| |||||||| || ||||||||||||||| Sbjct 745 GACACTATTGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 804 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | |||||||| ||||| ||||| || |||| | | || || | ||||| ||| Sbjct 805 CAAAGATTGATTTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 864 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | |||||||| ||||||||||| || |||||| Sbjct 865 ATTCAAAAGGAGTCCACTCTTCACCTCGTCTTG 897 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||| || || || || |||||||| || || |||||||| || Sbjct 457 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 516 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | || ||||||||| || || || || || ||||| || || Sbjct 517 GACACTATTGACAACGTCAAAAGTAAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 576 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | |||||||||||||||||||| || |||| | | ||| | | ||||| || Sbjct 577 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 636 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | || ||||| ||||| | ||||| || Sbjct 637 ATTCAGAAGGAGTCCACCTTACATCTTGT 665 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | ||||| || || || ||| | |||||||| || Sbjct 229 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 288 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | ||||| ||||||||||| || || |||||||| || Sbjct 289 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 348 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||| ||||||||||| || || | | | || || | || ||||| Sbjct 349 CAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 408 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | || || || || || | ||| | || ||| Sbjct 409 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTG 441 >seq12 Length=1042684 Score = 168 bits (186), Expect = 8e-37 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| || || || |||||||| || || |||||||| || | Sbjct 59356 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 59297 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | |||||||| |||||||| || ||||||||||||||| Sbjct 59296 GACACTATTGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 59237 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | |||||||| ||||| ||||| || |||| | | || || | ||||| ||| Sbjct 59236 CAAAGATTGATTTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 59177 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | |||||||| ||||||||||| || |||||| Sbjct 59176 ATTCAAAAGGAGTCCACTCTTCACCTCGTCTTG 59144 Score = 168 bits (186), Expect = 8e-37 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| || || || |||||||| || || |||||||| || | Sbjct 59605 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 59546 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | |||||||| |||||||| || ||||||||||||||| Sbjct 59545 GACACTATTGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 59486 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | |||||||| ||||| ||||| || |||| | | || || | ||||| ||| Sbjct 59485 CAAAGATTGATTTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 59426 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | |||||||| ||||||||||| || |||||| Sbjct 59425 ATTCAAAAGGAGTCCACTCTTCACCTCGTCTTG 59393 Score = 136 bits (150), Expect = 5e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | ||||| ||||||||||| || || ||||| || | Sbjct 488547 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCT 488606 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| | || || || |||||||| || ||||| || ||||| Sbjct 488607 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 488666 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||||||| | || |||| | | || | | ||||| || Sbjct 488667 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 488726 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 ||||||||||||| ||||| || | |||||| Sbjct 488727 ATCCAAAAGGAATCTACTCTACACTTGGTCTTG 488759 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | ||||| || || || ||| | |||||||| || Sbjct 59833 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 59774 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | ||||| ||||||||||| || || |||||||| || Sbjct 59773 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 59714 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||| |||||||| || || || | | | ||| | | ||||| || Sbjct 59713 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 59654 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 ||||||||||||| |||||||| || || ||| Sbjct 59653 ATCCAAAAGGAATCTACTCTTCACCTGGTGTTG 59621 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| || || |||||||| | ||||| || || || || | || ||||| || Sbjct 60064 ATTATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCT 60005 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 |||| ||| | || | ||| | |||||||| |||||||| || || |||||||| Sbjct 60004 TCCGATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGAT 59945 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || || | | || ||||| |||||||| || || || | | | || || | || || Sbjct 59944 CAACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTAC 59885 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 || | || ||||||||||| | ||||| || Sbjct 59884 AACATTCAGAAGGAATCCACCTTACATCTTGT 59853 >seq9 Length=439995 Score = 132 bits (146), Expect = 5e-26 Identities = 345/521 (66%), Gaps = 15/521 (3%) Strand=Plus/Plus Query 81223 TCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCG 81281 || ||| |||||||||| ||||| ||||| || || | ||||| || | ||| || Sbjct 235922 TCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCA-CG 235980 Query 81282 CGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCA 81341 ||||| | ||| ||||| | | || | ||| || | ||| || |||||||| Sbjct 235981 AATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCTGCATGCCA 236040 Query 81342 TGGCTCCAGATACACGGCGATCGACCC------CTTGCGACGGCCACCCTGGTTGACGTA 81395 ||||||||| | | ||||| | || |||| || ||||||||| || || Sbjct 236041 TGGCTCCAGGAAAAGGGCGAAAGCACCAGGTCTCTTGTTAC---CACCCTGGTCCACATA 236097 Query 81396 ACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGT 81455 ||||||||| || || ||||| | |||||| || | || | ||| |||||| || Sbjct 236098 ACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGT 236157 Query 81456 ACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGA 81515 ||| ||||| || || ||| || | ||| |||| |||||| | ||||||| Sbjct 236158 ACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTG- 236216 Query 81516 CCACTTT--GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCT 81573 || ||| |||||| |||||| |||| || |||||||| || ||||| || Sbjct 236217 -CAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCA 236275 Query 81574 TTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAAC 81633 | |||||| ||| |||||||| ||||| ||||| | | || || ||||| Sbjct 236276 TCCTTCATGGCAACTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGAAT 236335 Query 81634 AGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACG 81693 | ||||||| |||||| |||| || | ||||||| | ||| || | | || Sbjct 236336 AAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCACA 236395 Query 81694 CGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCAT 81734 | |||||| ||| || ||||| | || |||||||| Sbjct 236396 GATTCGATATCGCTACCATGGATACCTAGCGCCACACGCAT 236436 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 ||||||||||| | || || ||||| || ||| | || ||||| || ||| | ||| Sbjct 70574 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 70633 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || ||||| |||||||| || || || || ||||| || | | Sbjct 70634 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 70693 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||||||||||||| | || || | | | ||| | | ||||| || | ||||| Sbjct 70694 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 70753 Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618 ||||||||| | || |||||||| Sbjct 70754 GAATCCACTTTGCACTTAGTCTTG 70777 >seq5 Length=553118 Score = 129 bits (142), Expect = 7e-25 Identities = 320/476 (67%), Gaps = 21/476 (4%) Strand=Plus/Minus Query 81223 TCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCG 81281 || ||| |||||||||| ||||| ||||| || || | ||||| || | ||| || Sbjct 293607 TCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCA-CG 293549 Query 81282 CGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCA 81341 ||||| | ||| ||||| | | || | ||| || | ||| || |||||||| Sbjct 293548 AATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCA 293489 Query 81342 TGGCTCCAGATACACGGCGATCGACCC----CTTGCGACGGCCACCCTGGTTGACGTAAC 81397 ||| ||||| || | ||| | || || ||| | |||||||||| || |||| Sbjct 293488 TGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTT-ATTACCACCCTGGTCAACATAAC 293430 Query 81398 GGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTAC 81457 |||| || || || ||||| | |||||| || | ||| | || |||||| |||| Sbjct 293429 GGGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTAC 293370 Query 81458 CCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACC 81517 | | || || || | | || | || ||| ||||| || ||||| | | Sbjct 293369 CAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAG--C 293312 Query 81518 ACTTT--GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTT 81575 | ||| |||||| |||||| |||| ||| || ||||| |||||||| || | Sbjct 293311 AGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTC 293252 Query 81576 TTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAAC 81633 |||||| ||| ||||||||| ||||| ||||| |||| ||| |||||||||||| Sbjct 293251 CTTCATGGCAACCAAGAAACAAGAGGACATTTGAGG--TTTTGGAGTACCGGCATTGAAC 293194 Query 81634 AGTGTTGGGGTCGCGTGAATGAAATAACGGTTT---GACATCAGGTCATAGGTTTC 81686 | ||||| | |||||| | ||||| ||| ||||||| || ||| ||||| Sbjct 293193 AACGTTGGAGAGGCGTGAGTAAAATA---TTTTAGAGACATCAAGTTATACGTTTC 293141 >seq11 Length=657312 Score = 118 bits (130), Expect = 1e-21 Identities = 160/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 27396 TATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGT 27455 |||| | || || | | ||| || ||||| | || || ||||| || ||| | || || Sbjct 616817 TATTCCAATTTTGTACAGCTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGT 616758 Query 27456 TGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCC 27515 ||| || ||| | ||||| ||| | ||| | || || || |||||||| || || || Sbjct 616757 TGAATCTTCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCC 616698 Query 27516 TCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGC 27575 || ||||| || | | || ||||||||||||||| | || || | | | || ||| | Sbjct 616697 ACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATC 616638 Query 27576 AGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 ||||| || ||||||||||||||||| | ||| | |||||| Sbjct 616637 TGACTACAACATCCAAAAGGAATCCACTTTACATTTGGTCTTG 616595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309580178800