Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738395.1_202016-09- 21] 76 sequences; 12,238,557 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq12 120 7e-22 seq11 100 7e-16 >seq12 Length=1086630 Score = 120 bits (132), Expect = 7e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || |||||||||||||| || | || ||||| |||||||||| Sbjct 65704 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTA 65762 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || || || | ||||| || |||| | ||| ||||| || ||||||| Sbjct 65763 GTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAA 65822 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| |||||| | || | |||| ||| || || || || || ||||| || | Sbjct 65823 TTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCC 65882 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || ||||| || ||||| | ||||| Sbjct 65883 CTGTTAGAGTTTTGACGAAAATTTGCAT 65910 Score = 120 bits (132), Expect = 7e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || |||||||||||||| || | || ||||| |||||||||| Sbjct 66160 CAAG-TGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTA 66218 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| ||||| | |||||| || |||| | ||| |||||||| || || | Sbjct 66219 GCTGCTTACCGGCAAAGATCAACCTCTGTTGATCCGGAGGGATACCTTCCTTGTCCTGGA 66278 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || || | || | |||| || || || || | ||| || ||||| | Sbjct 66279 TTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTAC 66338 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| || |||| |||||| Sbjct 66339 CGGTCAAAGTCTTAACAAAGATCTGCAT 66366 Score = 116 bits (128), Expect = 9e-21 Identities = 153/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || |||||||| || |||||||||||||| |||| |||||||| |||||||| | Sbjct 502348 CAAG-TGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCA 502290 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | || || ||||| | | || |||||||| ||||| | Sbjct 502289 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGA 502230 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | |||| ||| || ||||| || |||||||| || | Sbjct 502229 TCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTAC 502170 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || | |||||| ||||| | ||||| || Sbjct 502169 CGGTTAAAGTCTTGACGAAAATTTGCATCTT 502139 Score = 105 bits (116), Expect = 2e-17 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || || || || |||||||| | || ||||| || || ||||||||||| | | ||| Sbjct 66374 CTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTT 66433 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || |||||||| || ||||| ||||| | || || || || | | ||| ||| Sbjct 66434 CTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCT 66493 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| ||||||||||| || || | || | | | || ||| || ||||| | Sbjct 66494 TCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAAT 66553 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || | |||||| ||||| | |||||| Sbjct 66554 GTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 66594 Score = 104 bits (114), Expect = 5e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 |||||| |||||||| ||||| ||||| || ||||| || | | ||||| |||||||| Sbjct 65473 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 65532 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||| || ||||| || || | || |||||||| | | || |||||||| ||||| Sbjct 65533 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 65592 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 |||||| || || | || | |||| ||| || || || || || ||||| || Sbjct 65593 AATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTT 65652 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || | ||||| Sbjct 65653 ACCTGTCAGTGTCTTGACAAAAATTTGCAT 65682 >seq11 Length=669555 Score = 100 bits (110), Expect = 7e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||| | ||| | ||| || || |||||||||||||| || | || |||||| || Sbjct 620338 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 620397 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||||| | || || || ||||| | || || ||||| | | ||| |||||||| Sbjct 620398 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 620457 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| || || |||||| | || | | |||| ||| || ||||| | ||| || Sbjct 620458 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 620517 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 || || || || | |||||| |||||| Sbjct 620518 GGTCTTACCAGTCAAAGTCTTAACGAAG 620545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819676466996