Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738485.1_202016-09- 21] 358 sequences; 12,381,618 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq12 154 3e-32 seq99 149 1e-30 seq9 140 8e-28 seq11 134 3e-26 >seq12 Length=1056780 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||||||||||||||||||||| ||||| || || || |||| || || || |||||||| Sbjct 59455 GACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 59514 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 || ||||| || || || || | | ||| ||||| ||||||| ||||||||||| || Sbjct 59515 TAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 59574 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 || || || ||||| |||||||| || || ||||||||| || || || ||||| Sbjct 59575 AATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACCTCTAGGGTTATAGTCTT 59634 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| ||||| | ||||| Sbjct 59635 ACCTGTCAGTGTCTTGACAAAAATTTGCAT 59664 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||||||||| || || ||||||||||| || || | | ||| || || ||||| ||||| Sbjct 59689 GTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTG 59748 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || ||||| | | ||||| || ||||| | ||||||||||||||||| || Sbjct 59749 CTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTT 59808 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || ||||| ||||| ||||| ||| ||||||||| | |||||| || || || || Sbjct 59809 CGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGT 59868 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | |||||| ||||| | |||||| Sbjct 59869 CAAAGTCTTAACAAAGATCTGCAT 59892 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| ||||| || || ||||||||||| || || | | || || || Sbjct 490331 TCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 490272 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || || ||||| | | |||||||||||| |||| |||||||| Sbjct 490271 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 490212 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || || || || || |||||||| |||||| || || || || Sbjct 490211 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAAT 490152 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || | |||||| || || | ||||| || Sbjct 490151 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 490113 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 || ||||| ||||| || | |||||||| || || ||||| ||||| | || || || Sbjct 59903 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 59962 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || ||||| |||||||| || || ||||| | | |||||| || ||||| | |||||| Sbjct 59963 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 60022 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| || || || || ||||| |||||||| || || |||||| || | || Sbjct 60023 TTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTT 60082 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || | |||||| || || | |||||| Sbjct 60083 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 60120 >seq99 Length=765 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| ||||||||||||||||| ||||| || || || |||| || || || |||||||| Sbjct 92 GACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTC 151 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 || || || || || ||||| | | ||| ||||| ||||||| ||||||||||| || Sbjct 152 TAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTG 211 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 || ||| || ||||| || || |||||||| ||||||||| || || || ||||| Sbjct 212 AATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTT 271 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| || || | ||||| Sbjct 272 ACCTGTCAGTGTCTTGACGAAAATTTGCAT 301 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || |||||||| || ||||||||||| | || || || || |||||||| ||||| || Sbjct 561 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 620 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || || || | | |||||| || ||||||| ||||||||||| || || || ||| Sbjct 621 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTG 680 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| || || ||||| || ||||||||| || || || ||||| || || ||||| Sbjct 681 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 740 Query 211098 TTTACAAACACCTGCAT 211114 || || || | ||||| Sbjct 741 TTGACGAAAATTTGCAT 757 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| | || | ||||||||| || || ||||||||||| || || | | ||| || Sbjct 312 AGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTA 371 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||| || ||||| || || || || | | ||||| || ||||| | ||||| Sbjct 372 CCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCT 431 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || || || ||||| ||| ||||| || || ||||| || ||||||||| || || Sbjct 432 TTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTT 491 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || ||||| || || || | ||||| Sbjct 492 ATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 529 >seq9 Length=445718 Score = 140 bits (154), Expect = 8e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| | |||||| |||||||| ||||| || || | | ||| || || Sbjct 74906 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 74847 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||||| ||||| || || ||||| | | |||||||||||| || | |||||||| Sbjct 74846 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 74787 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || |||||| || || || || || |||||||| |||||| || | |||||| Sbjct 74786 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 74727 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | |||||| ||||| Sbjct 74726 GGTCTTACCAGTCAAAGTCTTGACAAA 74700 >seq11 Length=651385 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | || | |||||| || ||||||||||| || || | || || || || Sbjct 621490 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 621549 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||||| ||||| || || ||||| | | |||||||||||| || | |||||||| Sbjct 621550 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 621609 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || || || || ||||||||||| |||||| || | |||||| Sbjct 621610 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 621669 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| || || | |||||| || || Sbjct 621670 GGTCTTACCAGTCAAAGTCTTAACGAA 621696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159146683114670