Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738495.1_202016-09-
21] 360 sequences; 12,343,512 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq12 149 5e-31
seq9 131 1e-25
seq258 116 3e-21
seq11 109 4e-19
>seq12
Length=1059835
Score = 149 bits (164), Expect = 5e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||||||| | ||| || ||||| |||||||||||||| |
Sbjct 63564 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 63623
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || ||||| || || ||| | ||||||||||| ||||| || |||
Sbjct 63624 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 63683
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || |||||||| | ||| |||||| | || | |||||| ||| ||| ||
Sbjct 63684 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 63743
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || |||||||| || || |||| ||||| || || || |||||
Sbjct 63744 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 63790
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||||||| | || || | ||||| ||||| || |||||||| || || ||||
Sbjct 62859 CCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 62918
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || ||||| || || ||| | |||||||||||||| || || |||
Sbjct 62919 AGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGA 62978
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| |||||| | || || | || | |||||||||| ||| ||
Sbjct 62979 ATACCTTCCTTGTCTTG-AATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 63037
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || |||||||| || || || | || || ||||| || |||||
Sbjct 63038 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 63085
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || || || ||||| ||||| ||||| || || |
Sbjct 498570 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 498511
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || | ||| || |||||| | ||||||||||| || || || |||
Sbjct 498510 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 498451
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || |||||||| | || |||||| | || | |||||||||| ||| |||
Sbjct 498450 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 498391
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| || || ||||| || || ||||| || || || || || ||||| ||
Sbjct 498390 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 498341
Score = 105 bits (116), Expect = 5e-18
Identities = 119/157 (76%), Gaps = 2/157 (1%)
Strand=Plus/Plus
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || ||||| || || ||| | |||||||||||||| || || |||||||| || ||
Sbjct 63179 ATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTT 63238
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| |||||| | || || | || | |||||||||| ||| || || || ||||
Sbjct 63239 GTCTTG-AATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTA 63297
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|||| || || || | || || ||||| || |||||
Sbjct 63298 TAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 63334
Score = 105 bits (116), Expect = 5e-18
Identities = 119/157 (76%), Gaps = 2/157 (1%)
Strand=Plus/Plus
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || ||||| || || ||| | |||||||||||||| || || |||||||| || ||
Sbjct 64137 ATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTT 64196
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| |||||| | || || | || | |||||||||| ||| || || || ||||
Sbjct 64197 GTCTTG-AATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTA 64255
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|||| || || || | || || ||||| || |||||
Sbjct 64256 TAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 64292
Score = 102 bits (112), Expect = 6e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
||||| | ||| | ||||| || || |||||||| ||||| | | || | | ||
Sbjct 63807 AGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCT 63866
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| || || || || ||| | ||||||||||| ||||| || || ||||| || ||||||
Sbjct 63867 TCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCT 63926
Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| |||||| | || || | || | || || ||| ||| ||||| | ||||| ||
Sbjct 63927 TG-AATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGT 63985
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| || || || || || || || ||||||||
Sbjct 63986 TTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 64018
Score = 98.7 bits (108), Expect = 8e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
||||| | ||| | ||||| || || |||||||| ||||| | | || | | ||
Sbjct 64537 AGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCT 64596
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| || || || || ||| | ||||||||||| ||||| || || ||||| || ||||||
Sbjct 64597 TCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCT 64656
Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| |||||| | || || | || | || || ||| ||| ||||| | | ||| ||
Sbjct 64657 TG-AATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGCTATGGT 64715
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| || || || || || || || ||||||||
Sbjct 64716 TTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 64748
>seq9
Length=440412
Score = 131 bits (144), Expect = 1e-25
Identities = 162/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || || || || | |||||||||||||||||||| || || |
Sbjct 70354 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 70295
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | || || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 70294 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 70235
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| ||| |||| |||||| | || | |||||||||| ||| ||
Sbjct 70234 ATACCTTCCTTGTCTTG-AATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 70176
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
||| | ||| || || || ||||| || || || |||||
Sbjct 70175 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 70137
>seq258
Length=451
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
||||| | ||| | ||||| || || |||||||| ||||| | | || | | ||
Sbjct 52 AGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCT 111
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| || || || || ||| | ||||||||||| ||||| || || ||||| || ||||||
Sbjct 112 TCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCT 171
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | ||| |||||| | || | |||||| ||| ||| || || || ||||||||
Sbjct 172 TGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTC 231
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || |||| ||||| || || || |||||
Sbjct 232 TTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 263
>seq11
Length=669432
Score = 109 bits (120), Expect = 4e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || || || | || |||||||| | |||||||| ||||| ||||| || || |
Sbjct 620533 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 620592
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 620593 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 620652
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || |||||||| | || |||||| | || | ||||||||| ||| |||
Sbjct 620653 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 620712
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
|| | ||| || || || ||||| || || ||||| ||
Sbjct 620713 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 620750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385217509850760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |