Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738515.1_202016-09-
21] 384 sequences; 12,318,890 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq9 199 8e-46
seq12 178 3e-39
seq11 176 9e-39
seq301 165 2e-35
seq293 165 2e-35
seq233 165 2e-35
>seq9
Length=444002
Score = 199 bits (220), Expect = 8e-46
Identities = 176/220 (80%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || |||||||||| ||| |||||||| || || || || ||||
Sbjct 71108 TACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAG 71049
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | ||||||||||||| | ||| || ||||||||||| | ||||||||| || || |
Sbjct 71048 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 70989
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||||||||||| || ||||| ||||| || ||| || ||| |
Sbjct 70988 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 70929
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|||||||||| || ||||| || ||||| ||||| |||||
Sbjct 70928 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 70889
>seq12
Length=1051427
Score = 178 bits (196), Expect = 3e-39
Identities = 179/230 (78%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || || |||| ||||| |||||||| || ||||||||||
Sbjct 59568 TACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAG 59627
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || ||||||||||||| ||||| || || ||||| || | |||||||||||||||||
Sbjct 59628 ACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAG 59687
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTT-ACATTTTCAATCGTATCATTAGGTTCT 82760
| || |||||||| |||||||| ||| ||||| || || ||||| || || || |||
Sbjct 59688 GAATACCTTCCTTGTCTTGAAT-TTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCA 59746
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | ||||| ||||| ||||| | || || || || || |||||
Sbjct 59747 ACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 59796
Score = 172 bits (190), Expect = 1e-37
Identities = 158/200 (79%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673
|| || || ||||| || || |||||||| || |||||||||||||||| || || ||
Sbjct 59828 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 59887
Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733
|||||||| | |||||||||||||||||| || |||||||| |||||||| || | ||
Sbjct 59888 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 59947
Query 82734 ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTC 82793
|| || || || ||||| || ||| |||||||| ||||| || || || ||||| |||
Sbjct 59948 ACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 60007
Query 82794 TTTACAAATATCTGCATTAT 82813
|| || || |||||||| ||
Sbjct 60008 TTGACGAAAATCTGCATAAT 60027
Score = 168 bits (186), Expect = 1e-36
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | || || ||||| ||||||||||| || || || || || || ||
Sbjct 493639 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 493580
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
| | ||||||| ||||| | ||| || ||||||||||| | ||||||||| || || ||
Sbjct 493579 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 493520
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| |||||||| ||||| ||||| | || ||||| ||||| || ||| || ||| ||
Sbjct 493519 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 493460
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || ||||| || || || ||||| || || || |||||
Sbjct 493459 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 493412
Score = 165 bits (182), Expect = 2e-35
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || ||||| ||||||||||| || || || || || ||||
Sbjct 59340 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 59399
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | ||||||| ||||||||||| || |||||||| || | ||| |||||||| ||||
Sbjct 59400 ACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAG 59459
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||| |||||||||||||| ||| || || ||||| || || || ||| |
Sbjct 59460 GGATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 59519
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | ||||| ||||| ||||| | || || || || || |||||
Sbjct 59520 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 59568
Score = 163 bits (180), Expect = 6e-35
Identities = 177/235 (75%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 82576 ATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTAT 82635
|||| |||| || ||||| | || || | ||| ||||| || || || || ||||| |
Sbjct 58857 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 58916
Query 82636 AATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGAT 82695
| || || || ||||||| ||||||||||| || || ||||| || | |||||| || |
Sbjct 58917 AGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGT 58976
Query 82696 CTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG 82755
||||||| || |||||||| |||||||| || | || || || ||||| || ||| ||
Sbjct 58977 CTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAG 59036
Query 82756 GTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || || | ||||| ||||| ||||||| ||||| ||||| || |||||
Sbjct 59037 ATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 59091
Score = 138 bits (152), Expect = 2e-27
Identities = 177/250 (71%), Gaps = 21/250 (8%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || ||||| ||||||||||| || || || || || ||||
Sbjct 59091 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 59150
Query 82642 A---------------------TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680
| || ||||||| ||||||||||| || || ||||| |
Sbjct 59151 ACAAGGTTCTACCNNNNNNNNNNAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAA 59210
Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740
| | |||||| || |||||||| || |||||||| |||||||| || | || || || |
Sbjct 59211 TCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGT 59270
Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800
|||| || ||| || ||| || || | ||||| ||||| ||||||| ||||| ||||
Sbjct 59271 CAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAA 59330
Query 82801 ATATCTGCAT 82810
| || |||||
Sbjct 59331 AAATTTGCAT 59340
>seq11
Length=675253
Score = 176 bits (194), Expect = 9e-39
Identities = 171/220 (78%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| ||||| || | || || || || | ||| ||||| || || || || || ||||
Sbjct 626221 TACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAG 626280
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||||| ||||||||||||| | ||| || ||||||||||| | ||||||||| || || |
Sbjct 626281 ATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 626340
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||| ||||| | || ||||| ||||| || ||| || ||| |
Sbjct 626341 GGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAA 626400
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|||||||||| || ||||| || ||||| ||||| || ||
Sbjct 626401 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 626440
>seq301
Length=383
Score = 165 bits (182), Expect = 2e-35
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || ||||| ||||||||||| || || || || || ||||
Sbjct 11 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 70
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | |||||||||||||||| || || || |||||||| | || |||||||||||||
Sbjct 71 ACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAG 130
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| || || || || | || || || || ||||| || | ||| |
Sbjct 131 GGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAA 190
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || ||||| || || || || ||||| ||||| ||||| ||||||||
Sbjct 191 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 239
Score = 118 bits (130), Expect = 2e-21
Identities = 94/113 (83%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673
|| || || ||||| || || |||||||| || |||||||||||||||| || || ||
Sbjct 271 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 330
Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726
|||||||| | |||||||||||||||||| || |||||||| |||||||| ||
Sbjct 331 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTT 383
>seq293
Length=395
Score = 165 bits (182), Expect = 2e-35
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || ||||| ||||||||||| || || || || || ||||
Sbjct 229 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 170
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | |||||||||||||||| || || || |||||||| | || |||||||||||||
Sbjct 169 ACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAG 110
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| || || || || | || || || || ||||| || | ||| |
Sbjct 109 GGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAA 50
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || ||||| || || || || ||||| ||||| ||||| ||||||||
Sbjct 49 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 1
Score = 132 bits (146), Expect = 9e-26
Identities = 127/163 (78%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 82648 TTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTC 82707
||||||| ||||||||||| || || ||||| || | |||||| || |||||||| || |
Sbjct 391 TTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATAC 332
Query 82708 CTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCA 82767
||||||| |||||||| || | || || || ||||| || ||| || ||| || || |
Sbjct 331 CTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTA 272
Query 82768 AAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| ||||| ||||||| ||||| ||||| || |||||
Sbjct 271 GGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 229
>seq233
Length=511
Score = 165 bits (182), Expect = 2e-35
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || ||||| ||||||||||| || || || || || ||||
Sbjct 283 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 342
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | |||||||||||||||| || || || |||||||| | || |||||||||||||
Sbjct 343 ACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAG 402
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| || || || || | || || || || ||||| || | ||| |
Sbjct 403 GGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAA 462
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || ||||| || || || || ||||| ||||| ||||| ||||||||
Sbjct 463 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 511
Score = 152 bits (168), Expect = 1e-31
Identities = 154/198 (78%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673
|| || || ||||| || || |||||||| || |||||||||||||||| || || ||
Sbjct 87 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 146
Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733
|||||||| | |||||||||||||||||| || |||||||| |||||||| ||| |||||
Sbjct 147 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAAT-TTTACTTTT 205
Query 82734 -ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGT 82792
|| || ||||| || || || ||| || || | ||||| ||||| ||||| | ||
Sbjct 206 GACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGT 265
Query 82793 CTTTACAAATATCTGCAT 82810
|| || || || |||||
Sbjct 266 TTTGACGAAAATTTGCAT 283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981822369410176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |