Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738585.1_202016-09-
21] 400 sequences; 12,362,452 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq9 91.5 1e-13
seq12 89.7 5e-13
seq133 87.8 2e-12
>seq9
Length=443051
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| || | ||| ||||| || | || ||||||||||| |||||||| || |
Sbjct 73350 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 73291
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || |||||| | ||| ||||||||| |||||| | ||| || || || ||
Sbjct 73290 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 73231
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| ||||| ||| ||| || | | || | ||||| | | ||| |||
Sbjct 73230 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 73171
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 143175
|| | ||| | ||||| || ||||| || || || ||
Sbjct 73170 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 73133
>seq12
Length=1052065
Score = 89.7 bits (98), Expect = 5e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041
|||| || || || ||||| || ||||| || || || || ||||| ||||||
Sbjct 61144 TGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGT 61203
Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101
||||| ||| | |||| | |||||| || ||||| || ||||| ||||| |||||||
Sbjct 61204 TTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTT 61263
Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161
|| | | || | ||||| | | ||| || || | || | ||||| || |||
Sbjct 61264 GACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTC 61323
Query 143162 AATGTTTTTACGAATATTTGCATA 143185
| ||| || ||||| |||||||||
Sbjct 61324 AGTGTCTTGACGAAAATTTGCATA 61347
Score = 82.4 bits (90), Expect = 8e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| || || || || ||||||||||| || || || |||||| || || |||||
Sbjct 62167 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 62226
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
||| |||||| | ||| ||||| ||||| || ||||| ||||| |||||| ||
Sbjct 62227 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 62286
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | || || | | ||| ||||| | || | || || |||||||| ||
Sbjct 62287 ACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 62346
Query 143168 TTTACGAATATTTGCATA 143185
|| ||||| || ||||||
Sbjct 62347 TTGACGAAAATCTGCATA 62364
Score = 82.4 bits (90), Expect = 8e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| || || || || ||||||||||| || || || |||||| || || |||||
Sbjct 62416 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 62475
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
||| |||||| | ||| ||||| ||||| || ||||| ||||| |||||| ||
Sbjct 62476 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 62535
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | || || | | ||| ||||| | || | || || |||||||| ||
Sbjct 62536 ACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 62595
Query 143168 TTTACGAATATTTGCATA 143185
|| ||||| || ||||||
Sbjct 62596 TTGACGAAAATCTGCATA 62613
>seq133
Length=705
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| || || || || ||||||||||| || || || |||||| || || |||||
Sbjct 47 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 106
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
||| |||||| | ||| ||||| ||||| || ||||| ||||| |||||| |||
Sbjct 107 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTACTTTTG 166
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | | ||| || || | || | ||||| || || | |||
Sbjct 167 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 226
Query 143168 TTTACGAATATTTGCATA 143185
|| ||||| |||||||||
Sbjct 227 TTGACGAAAATTTGCATA 244
Score = 82.4 bits (90), Expect = 8e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| || || || || ||||||||||| || || || |||||| || || |||||
Sbjct 503 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 562
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
||| |||||| | ||| ||||| ||||| || ||||| ||||| |||||| ||
Sbjct 563 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 622
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | || || | | ||| ||||| | || | || || |||||||| ||
Sbjct 623 ACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 682
Query 143168 TTTACGAATATTTGCATA 143185
|| ||||| || ||||||
Sbjct 683 TTGACGAAAATCTGCATA 700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507011864928000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |