Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738585.1_202016-09-
21] 400 sequences; 12,362,452 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq133 118 9e-22
seq12 118 9e-22
seq264 104 2e-17
>seq133
Length=705
Score = 118 bits (130), Expect = 9e-22
Identities = 158/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 48511 CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC 48570
||||| ||| | ||| | ||| |||||| |||||||||||||||| || || |
Sbjct 484 CCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACC 543
Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630
||| || |||||||||||| | | || || | || ||||| || | || ||||||
Sbjct 544 GTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTT 603
Query 48631 GTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTT 48688
||| ||||||| ||| | | | || |||||||||| ||| || || | ||||
Sbjct 604 GTCTTGAATTTTCGACTTAACGTTGTCG--ATGGTATCGGAAGATTCAACTTCCAATGTT 661
Query 48689 ATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|||||||||||||| | ||| || || |||||||||||
Sbjct 662 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 699
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || | ||| || ||||| || ||||| || |||||||| |||||||| ||||
Sbjct 244 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 303
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || |||| || |||||||||||| | | || || | ||| ||||| ||
Sbjct 304 CAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 363
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| || |||||||||| |||||| ||| | | || || |||| || ||
Sbjct 364 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 423
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | || |||||||||||||| | ||| || ||||| ||||||||
Sbjct 424 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 471
Score = 89.7 bits (98), Expect = 4e-13
Identities = 153/220 (70%), Gaps = 8/220 (4%)
Strand=Plus/Plus
Query 48511 CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC 48570
||||| ||| | ||| | ||| |||||| |||||||||||||||| || || |
Sbjct 28 CCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACC 87
Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630
||| || |||||||||||| | | || || | || ||||| || | || ||||||
Sbjct 88 GTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTT 147
Query 48631 GTCCATAATTTTCTGCTTGATAGACG----CTATGGTATCGGTAGACTCCGTCTCGACTG 48686
||| ||||| | ||| | |||| | || || |||| ||| || ||| | |
Sbjct 148 GTCTTGAATTT--TACTT--TTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGG 203
Query 48687 TTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|||| || || || || |||||||| || ||||| |||||
Sbjct 204 TTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 243
>seq12
Length=1052065
Score = 118 bits (130), Expect = 9e-22
Identities = 158/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 48511 CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC 48570
||||| ||| | ||| | ||| |||||| |||||||||||||||| || || |
Sbjct 62148 CCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACC 62207
Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630
||| || |||||||||||| | | || || | || ||||| || | || ||||||
Sbjct 62208 GTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTT 62267
Query 48631 GTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTT 48688
||| ||||||| ||| | | | || |||||||||| ||| || || | ||||
Sbjct 62268 GTCTTGAATTTTCGACTTAACGTTGTCG--ATGGTATCGGAAGATTCAACTTCCAATGTT 62325
Query 48689 ATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|||||||||||||| | ||| || || |||||||||||
Sbjct 62326 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 62363
Score = 118 bits (130), Expect = 9e-22
Identities = 158/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 48511 CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC 48570
||||| ||| | ||| | ||| |||||| |||||||||||||||| || || |
Sbjct 62397 CCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACC 62456
Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630
||| || |||||||||||| | | || || | || ||||| || | || ||||||
Sbjct 62457 GTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTT 62516
Query 48631 GTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTT 48688
||| ||||||| ||| | | | || |||||||||| ||| || || | ||||
Sbjct 62517 GTCTTGAATTTTCGACTTAACGTTGTCG--ATGGTATCGGAAGATTCAACTTCCAATGTT 62574
Query 48689 ATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|||||||||||||| | ||| || || |||||||||||
Sbjct 62575 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 62612
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || | ||| || ||||| || ||||| || |||||||| |||||||| ||||
Sbjct 60794 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 60853
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || |||| || |||| ||||||| | | || || | ||| ||||| ||
Sbjct 60854 CAAGGTTCTACCGTCTTCTAGCTACTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 60913
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| || |||||||||| |||||| ||| | | || || |||| || ||
Sbjct 60914 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 60973
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | || |||||||||||||| | ||| || ||||| ||||||||
Sbjct 60974 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 61021
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || | |||||| || || | ||||| ||| |||||||||||| ||||| || |
Sbjct 60566 ACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGA 60625
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| || | || || || ||||||||| | |||| || | ||||| || ||
Sbjct 60626 CAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGG 60685
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| || ||||||||| ||||||| ||| | | || || || | ||| ||
Sbjct 60686 AATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 60745
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | ||||| || ||||| || || || || |||||||| |||||
Sbjct 60746 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 60793
>seq264
Length=489
Score = 104 bits (114), Expect = 2e-17
Identities = 155/218 (71%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 48511 CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC 48570
||||| ||| | ||| | ||| |||||| |||||||||||||||| || || |
Sbjct 52 CCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACC 111
Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630
||| || |||||||||||| | | || || | || ||||| || | || ||||||
Sbjct 112 GTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTT 171
Query 48631 GTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTT 48688
||| ||||||| ||| | | | || |||||||||| ||| || ||| | |||
Sbjct 172 GTCTTGAATTTTCGACTTAACGTTGTCG--ATGGTATCGGAAGATTCAACCTCTAGGGTT 229
Query 48689 ATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| || ||||| || || || || |||||||| |||||
Sbjct 230 ATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 267
Score = 89.7 bits (98), Expect = 4e-13
Identities = 153/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || | ||| || ||||| || ||||| || |||||||| |||||||| ||||
Sbjct 268 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 327
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || |||| || ||| |||||||| | | || || | ||| ||||| ||
Sbjct 328 CAAGGTTCTACCGTCTTCTAGCCGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 387
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| || |||||||||| |||||| ||| | | || || |||| || ||
Sbjct 388 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 447
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAAT 48720
||| | || |||||||||||||| | ||| || ||||| ||
Sbjct 448 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGAT 489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421249146400400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |