Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738585.1_202016-09-
21] 400 sequences; 12,362,452 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq12 98.7 9e-16
seq133 93.3 4e-14
>seq12
Length=1052065
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979
||||| | | ||||| || ||||||||||| || || || | ||||| |||||
Sbjct 62409 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 62468
Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039
||||||| | |||| | | |||||||||||||| || ||||| || || ||||||
Sbjct 62469 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTT 62528
Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099
|| | | || | ||||||| | || ||||| | || | |||||||| ||
Sbjct 62529 CGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGT 62588
Query 132100 CAGAGTTTTTATGAAAATCTGCATGACTTATTAG 132133
|| ||| || | |||||||||||| | ||||||
Sbjct 62589 CAAAGTCTTGACGAAAATCTGCATAATCTATTAG 62622
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979
||||| | | ||||| || ||||||||||| || || || | ||||| |||||
Sbjct 62160 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 62219
Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039
||||||| | |||| | | |||||||||||||| || ||||| || || ||||||
Sbjct 62220 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTT 62279
Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099
|| | | || | ||||||| | || ||||| | || | |||||||| ||
Sbjct 62280 CGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGT 62339
Query 132100 CAGAGTTTTTATGAAAATCTGCAT 132123
|| ||| || | ||||||||||||
Sbjct 62340 CAAAGTCTTGACGAAAATCTGCAT 62363
>seq133
Length=705
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979
||||| | | ||||| || ||||||||||| || || || | ||||| |||||
Sbjct 496 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 555
Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039
||||||| | |||| | | |||||||||||||| || ||||| || || ||||||
Sbjct 556 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTT 615
Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099
|| | | || | ||||||| | || ||||| | || | |||||||| ||
Sbjct 616 CGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGT 675
Query 132100 CAGAGTTTTTATGAAAATCTGCAT 132123
|| ||| || | ||||||||||||
Sbjct 676 CAAAGTCTTGACGAAAATCTGCAT 699
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979
||||| | | ||||| || ||||||||||| || || || | ||||| |||||
Sbjct 40 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 99
Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039
||||||| | |||| | | |||||||||||||| || ||||| || || ||||||
Sbjct 100 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTT 159
Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099
||| | | || | ||| |||| | || || || | || | || || || ||
Sbjct 160 ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGT 219
Query 132100 CAGAGTTTTTATGAAAATCTGCAT 132123
|||||||| | |||||| |||||
Sbjct 220 TAGAGTTTTGACGAAAATTTGCAT 243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476608816944000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |