Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738605.1_202016-09- 21] 124 sequences; 11,913,607 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5 369 5e-97 seq10 214 3e-50 >seq5 Length=559862 Score = 369 bits (408), Expect = 5e-97 Identities = 1346/2077 (65%), Gaps = 55/2077 (3%) Strand=Plus/Minus Query 78714 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 78772 |||| || |||||||| | ||| ||||| | || || | | ||||||||| || || | Sbjct 296582 CAATAGTAAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 296523 Query 78773 TTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCT 78831 | | || |||||||||| ||||||||||| |||||||| ||| | || Sbjct 296522 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 296463 Query 78832 GCTATATGGATA--TTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCA 78889 | || | ||| |||| ||| ||| |||||| || || | | || || |||| Sbjct 296462 G---TAAGAATAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCA 296406 Query 78890 TTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCT 78948 | || ||||| |||||||||| ||||||||||| ||| || || || || | ||| ||| Sbjct 296405 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCT 296347 Query 78949 TCTGGAAGGTTTGT--ATTCT-GAATGGATCCACCATCTGCCATAATCCTATTCT---TG 79002 | ||||| |||| | ||| ||||||| ||| | || ||||| || || | Sbjct 296346 TGTGGAACATTTGGTAAGTCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTC 296290 Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 79062 || | |||| ||| | | || || | | || | | || || || || Sbjct 296289 ATACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACC 296230 Query 79063 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122 || ||||| || || || || | || | ||| ||||| || |||||| | || Sbjct 296229 TGGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACAT 296170 Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA 79182 ||||||| ||||| ||||| | || ||||| || ||||| ||||||| || | Sbjct 296169 TCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAA 296110 Query 79183 TTTCTAAGACCGTATGATCTGATTTTATCTTTTAG--AGAT-TCCCAATCCCAAAGATCA 79239 ||||||| ||| ||| | | || |||||||| || | ||||||||||| | | Sbjct 296109 TTTCTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCG 296053 Query 79240 GACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTG 79299 | || | ||| | |||| | ||||| |||| | | ||| |||||| | Sbjct 296052 TAGGGTTTTTGGTCCCACATATCAAACTGTAGTGTACCTTGAGAAGCAGGAGATCCTTGG 295993 Query 79300 TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAA 79359 | ||||| || || || ||||| | |||| ||||||| || || | | | | | Sbjct 295992 AAAGTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGA 295933 Query 79360 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAA 79419 ||||| ||||| || || | |||| || | ||||| ||||||||| || Sbjct 295932 TAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAA 295873 Query 79420 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 79479 ||| || || || | ||| || | ||||||||||| | | | || |||||||||||| Sbjct 295872 CGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTC 295813 Query 79480 TTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 79539 |||| || || |||||| || ||| || |||||| ||| || | | | || | | Sbjct 295812 ATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAA 295753 Query 79540 TTCC---TGACTATT-----ACTTTGACCACATCCTTT--AGTT---TGAGAAAATCAAA 79586 || | |||| | | | ||| | || ||| |||| || | || || | Sbjct 295752 TTACGAGTGACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTATGTGGAAGTCTTA 295693 Query 79587 TCGTCCATCTA--TTACAAACA-TGTTC--AACGCGACAGATGCCAGATTACAAACGGCT 79641 | ||| | || ||| | || | || || || || |||| |||||||| || Sbjct 295692 CCATCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAGCA 295633 Query 79642 ACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTT 79701 |||| | | | | |||| | |||||| ||| | ||| |||| ||| Sbjct 295632 GTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACA 295573 Query 79702 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTA 79761 ||||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || ||| Sbjct 295572 CCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTA 295513 Query 79762 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGAC 79821 ||||||||| | |||| ||| | ||| | | ||| | | | || || || || | Sbjct 295512 CCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---AGTC 295456 Query 79822 TTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACA 79881 || | |||| | ||||| | ||||||| || |||||||| || || | Sbjct 295455 TTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAA 295396 Query 79882 TCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACT 79941 ||| ||| |||||| | ||| | | || | ||| |||| || | || Sbjct 295395 TCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACA 295336 Query 79942 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCC 80001 || ||||| || |||||||||||||| ||||| || | |||||| | | | ||| Sbjct 295335 CGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCC 295276 Query 80002 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 80061 || || || ||||| ||| ||| | || | | ||||||| |||||| |||||| Sbjct 295275 TCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCATGGTTCC 295216 Query 80062 AAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 80121 | ||| | ||| | | || |||| ||| || || ||||| || | || | |||||| Sbjct 295215 AGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCGGTG 295156 Query 80122 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATA 80181 ||||| |||| | | ||| ||||| | ||| || || ||||| || || || | || Sbjct 295155 TTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATG 295096 Query 80182 TAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 80241 || ||| | | |||||| ||| || |||||| || || || || |||| || Sbjct 295095 TAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAA 295036 Query 80242 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTA 80301 || || || ||| || || || || || || ||||| || || || ||||| | Sbjct 295035 ATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCA 294976 Query 80302 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 80361 | | ||||| |||||||| | ||| || ||||| || || || ||||| Sbjct 294975 ACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAG 294916 Query 80362 GCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCC 80421 ||||| ||||| ||||| ||||| | || ||||| || | ||| | || ||||| Sbjct 294915 GCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCT 294856 Query 80422 CATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 80481 | || || |||| ||||| | ||| | | || || || | ||| | | |||| Sbjct 294855 CTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-CTTG 294797 Query 80482 -TTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TG 80539 || ||| | | || ||||| |||||||||||||||||||||||| |||| || Sbjct 294796 ACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTG 294737 Query 80540 AAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 80599 |||| |||| || || | ||| | ||||| | ||||||||| | || | || | || Sbjct 294736 AAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATAT 294678 Query 80600 CCATGGTGATA-CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGT 80656 || || | | | || || || |||| | || ||| | || ||| || || Sbjct 294677 ---TGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATC 294621 Query 80657 TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATA 80716 | | | ||| || | |||| | |||| ||||| | |||| || |||| ||| || | Sbjct 294620 TATAAAGATCTTCGACAACTTTAGAAAATTGTTTTGTAGTTTGTTTATGTAAATTAGAAA 294561 Query 80717 CGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 ||| ||||| || |||| |||| ||||||||||| Sbjct 294560 TGGCAATTCTAGCAGCTAGGGTGGCGTAATCTGGATG 294524 >seq10 Length=726365 Score = 214 bits (236), Expect = 3e-50 Identities = 590/898 (66%), Gaps = 11/898 (1%) Strand=Plus/Minus Query 49649 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 49708 |||| |||||||| || |||||||| ||| || | |||||||| || || || | Sbjct 385836 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTGGTCT 385778 Query 49709 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttt 49768 | || |||| || || |||||||||||||| || || || || || || ||| | Sbjct 385777 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 385718 Query 49769 tAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTT 49828 | || || || | || ||| || ||||| || || | ||| ||||| | | Sbjct 385717 TGTTACCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 385658 Query 49829 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAAT-TCTT-GTTCAAT 49886 || ||||| |||| | |||||| | || | ||||| | |||| ||||||| Sbjct 385657 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAAT 385600 Query 49887 GGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATG 49946 || || || || | ||| | ||| | || ||| | | ||||| Sbjct 385599 TTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATG 385540 Query 49947 TTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTT 50006 |||| ||| ||||| || ||| ||||| ||| |||||||||| || | |||||| Sbjct 385539 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 385480 Query 50007 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 50066 |||||| || | |||||||| | || | |||||| | ||| || ||||| ||||| || Sbjct 385479 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 385420 Query 50067 CCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC 50126 || || || |||| ||||| | | |||||||||||| ||||| || ||| | ||| Sbjct 385419 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGC 385360 Query 50127 G---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 50183 | ||| || ||||| || |||||| |||||||||| | || || || Sbjct 385359 GTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGT 385300 Query 50184 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 50243 | |||||||| || | | | |||| ||| || || | |||||||||||||| Sbjct 385299 GTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAA 385240 Query 50244 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 50303 | || |||| || ||||| |||||||| || || || |||||||||| | Sbjct 385239 CAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTT 385180 Query 50304 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCC 50363 ||||| | ||| || ||||| || | || |||| | || |||||||| || || || Sbjct 385179 TGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 385120 Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTT---GGGTGT 50420 |||| || || ||||| || | || || ||| | | ||||| | | Sbjct 385119 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCAT 385060 Query 50421 TAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 50480 | || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || || Sbjct 385059 TCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGA 385000 Query 50481 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACA 50538 || || || || || | |||||| ||||| || | || ||||||| |||| Sbjct 384999 AGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTAATAGGGAAAAGAACA 384942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267686683360