Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738605.1_202016-09-
21] 124 sequences; 11,913,607 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq2 136 5e-27
seq15 114 2e-20
>seq2
Length=810824
Score = 136 bits (150), Expect = 5e-27
Identities = 389/589 (66%), Gaps = 28/589 (5%)
Strand=Plus/Minus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| |||| || ||||| | ||| ||| ||| || ||||||||| ||
Sbjct 397644 AAGTTTGAAGATTTGGGTGTCGGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGA 397585
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517
|| ||||| | || ||||| | | ||| ||||| | || | ||| |
Sbjct 397584 GCGTTTGCAAGTCGAATCTTTCCTCCTTCAGTTATAGAAAAACTGGGTATTTCTCATGTT 397525
Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577
||||| | |||| | || ||||| ||| ||||| || ||||| || || |||
Sbjct 397524 AAAGGTTTGCTATTGTACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATT 397465
Query 164578 GCT-CAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGA 164632
| | ||| | | ||| || || || ||||| || |||||||| ||| | ||||
Sbjct 397464 GGTACAA--TGCTGAAT-GCTAAAGAGCCC--AAAATCGTCAATGGTCCAGAAATTTTGA 397410
Query 164633 ACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAG 164692
||| || || ||| ||||||| || || | || || ||| |||| || |||| ||
Sbjct 397409 GCAAGTACGTTGGTTCTTCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAG 397350
Query 164693 AACAAAAGAAAGC--AGGTTTAGCTAG-TAAATTACATGTTATTGTTTTTGATGAGATAG 164749
|| | | | || ||| | || | | |||||| ||||| |||| |||||| | |
Sbjct 397349 AATATAGG---GCCAAGGGTGAGGAATCTTCCTTACATATTATTATTTTCGATGAGCTGG 397293
Query 164750 ATGCTCTTTGCAAAAAACGTGGT------GATAATATTATTCATGATG----CAGTG--G 164797
|| || ||| ||| | | ||| | | || || | || | || || |
Sbjct 397292 ATTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAG 397233
Query 164798 TTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAG 164857
||||||| ||| | ||||||| |||||||| || || ||||||||||| || | |
Sbjct 397232 TTAATCAATTGTTAGCTAAAATGGATGGTGTTGATCAGTTGAATAATATTTTGGTTATTG 397173
Query 164858 GTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAAT 164917
|||||||||| || |||||||| || | |||| | || || || ||| |||| |||
Sbjct 397172 GTATGACCAATCGTAAAGATTTAATAGACGGTGCTCTTTTGCGTCCAGGTAGATTTGAAG 397113
Query 164918 TGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966
| || | ||||| |||||||| || ||||| | || ||||||||
Sbjct 397112 TCCAAGTTGAAATTCATTTACCCGATGAAAAAGGAAGACTCCAAATTTT 397064
>seq15
Length=1046377
Score = 114 bits (126), Expect = 2e-20
Identities = 123/163 (75%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 19341 TAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAG 19400
||||| || | || || ||| |||| ||||| || ||||||||| | | |||||| |
Sbjct 591645 TAAGAACTACAAAGATTCCTCAAATTGGTGACAAATTTGCTTCTCGTCACGGTCAAAAGG 591586
Query 19401 GCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGC 19460
| || |||||| | |||||| |||||||||||| ||||| ||| ||||| || |
Sbjct 591585 GTACTATTGGTATCACATATCGTAGAGAAGATATGCCATTTACCGCAGAAGGTATTGTTC 591526
Query 19461 CGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
| ||| | ||||||||||| |||||| ||||| ||| |||||
Sbjct 591525 CAGATTTGATTATTAACCCTCATGCTATTCCATCTCGTATGAC 591483
Score = 107 bits (118), Expect = 2e-18
Identities = 405/632 (64%), Gaps = 49/632 (8%)
Strand=Plus/Plus
Query 6699 TGGATGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAAT-TAT 6757
||||||||||||||||||| | |||||| ||| || || |||||| | ||| | |
Sbjct 450246 TGGATGAGGATTATAATCTTCAATTTCAAAGTCTGTCAACTTGAAATCA--TCAATGTCT 450303
Query 6758 CAGACtttttttttAATATTACAACAGGTGAA-GGTTTT--ATTGATCGAGTTAATTGTT 6814
|| | ||||||| || | ||| ||| || ||| || || | |||||
Sbjct 450304 TTAACGTCCCTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATT--TCTGGTGATTTGTT 450361
Query 6815 CTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATT 6874
|||| | || | || || ||| ||||| ||| ||||| || | |||||||| || |
Sbjct 450362 CTTTCAAGGCATCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACT 450421
Query 6875 CACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTA 6934
||||||| | ||| || ||| ||| |||||| | || || || ||||| || || |
Sbjct 450422 CACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAA 450481
Query 6935 CATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAG-ATAAA 6993
||||| ||||| || || |||||||| || | ||| || || ||| || ||
Sbjct 450482 TGTTAAATGGTACTCCCAACCCCATATCACAAGAACGTTGGTACAAT----AAGCATGAA 450537
Query 6994 A---------TATTG------------TCTATAG---------CATAAAATTGACACAAT 7023
| || | ||| | | |||| || || | ||
Sbjct 450538 AGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAA 450597
Query 7024 ACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAA 7083
| ||| ||||| || ||| | | || | ||||| ||| ||||| ||| |||| |
Sbjct 450598 ATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATG 450657
Query 7084 ATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATA 7143
|| | |||||| | |||||||| |||| ||| |||| || |||||||| |||
Sbjct 450658 ATTCTTCTATCGTAGGGATTTGTCTTTAGTTTATGGATAACCTGTTTCAATTGATCAATA 450717
Query 7144 CCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGA 7203
|| || || ||| | || || | | || ||||| |||||||| |||||||||
Sbjct 450718 CCTTGTCCAGTATAGTCGTCATCGCACGTCTTGTATTTAGCACCAAAATGCCTCCATTGA 450777
Query 7204 AACCCATAAATAGGACCTAAATCACCTTCTTCACGATGATTAAATCCTAATCGATTTAAA 7263
|| ||||||| || || | ||| ||| ||| | || || ||||| | || ||||
Sbjct 450778 AATCCATAAACGGGCCCCAGATCTCCTACTTTCCTATCTTTGAATCCCATCTTATCTAAA 450837
Query 7264 TTAGATT---TTGATCCATAAGCATCCCAAAT 7292
| ||| ||||||| | | ||||||||
Sbjct 450838 T---ATTCACGAGATCCATTACCGTCCCAAAT 450866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871076398400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |