Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738605.1_202016-09-
21] 124 sequences; 11,913,607 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq12 120 3e-22
seq11 105 6e-18
seq9 105 6e-18
>seq12
Length=1037636
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || |||||||||||||| |||||| ||| || |||||||| ||||| | |
Sbjct 52124 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 52183
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| |||| |||| ||||| |||||||| ||||| ||||| | || || || | ||||
Sbjct 52184 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 52243
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | ||||||| | ||| ||| | | | |||| | | |||||| ||||| ||
Sbjct 52244 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCGGAAGATTCAAC 52302
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | || || || ||||| |||| || || ||||| || |||||
Sbjct 52303 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 52350
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||||||||| || | ||| |||||||| ||||||||||| | |
Sbjct 52352 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCAGAC 52411
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| |||| |||| || ||||||||||| ||||| ||||| | || || || | |||
Sbjct 52412 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 52471
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | ||||||| | ||| ||| | | | |||| | | || ||| ||||| ||
Sbjct 52472 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 52530
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| || || |||||||| |||||||| || || || ||||||||
Sbjct 52531 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 52578
Score = 98.7 bits (108), Expect = 9e-16
Identities = 155/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581
||||||||||| || | ||| |||||||| |||||||| || | |||||||| |
Sbjct 51908 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCA 51967
Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641
|| || || |||||||| ||||| ||||| | ||| || |||| ||| | | || |||
Sbjct 51968 TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATAC-CTTCTTT 52026
Query 35642 TCCATGATCTTTTGCTTCAGA-GTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGA 35699
| ||| |||| ||| || |||| | | |||||| ||||| ||||| | || |
Sbjct 52027 ATCTTGA-ATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTA 52085
Query 35700 TCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || || || || | |||||| || || || |||||
Sbjct 52086 TAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 52122
Score = 89.7 bits (98), Expect = 5e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566
|| ||||| | |||||||| || | || | || |||||||||||| ||||| ||
Sbjct 51665 TTACCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCC 51724
Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626
| || |||| | || || || || ||||| ||||| ||||| | |||||||| | |
Sbjct 51725 GACAGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGA 51784
Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTC 35685
|||| | ||||||| | ||| ||||| | | |||| | | ||||| |||||
Sbjct 51785 GGAATACCTTCCTTGT-CTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTC 51843
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| | || || || ||||| |||| || || || || || |||||
Sbjct 51844 AACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 51894
>seq11
Length=644812
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | ||| ||||| ||||||||||| || |||||||| |||||||| || |
Sbjct 617126 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 617185
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| |||| |||| |||| |||||||| ||||| ||||| | || ||||| | ||
Sbjct 617186 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 617245
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||||| |||||| ||| | | | | | ||||| ||||| ||
Sbjct 617246 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGATTCAACT 617305
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727
|||| ||||| || ||||| |||||||| || || ||
Sbjct 617306 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 617343
>seq9
Length=438249
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||| || || || || || || |||||||||||||| || | |
Sbjct 70535 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 70476
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||||| |||| |||| |||||||| ||||| ||||| | || ||||| | ||
Sbjct 70475 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 70416
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||||| |||||| ||| | | | | | ||||| ||||| ||
Sbjct 70415 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 70356
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727
|||| ||||| || ||||| |||||||| || |||||
Sbjct 70355 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 70318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450792901269920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |