Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738605.1_202016-09-
21] 124 sequences; 11,913,607 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq12 111 1e-19
>seq12
Length=1037636
Score = 111 bits (122), Expect = 1e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710
||||||| ||||| ||| ||| |||||||||||||| || || || || | ||||
Sbjct 52139 AACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCT 52198
Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
|| || ||||| ||||| || |||| | ||||| || | |||| | ||||||| |
Sbjct 52199 TCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGT-C 52257
Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829
||| |||| | | |||| | | | ||||||| || || ||||| | ||||| ||
Sbjct 52258 TTGAATTTTCGACTTAACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 52317
Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| ||||| ||||| || ||||| |||||
Sbjct 52318 CTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 52350
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710
||||||| || || || ||||| || ||||| || || || || || | ||||
Sbjct 52367 AACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCAGACAGCGTTCTACCGTCT 52426
Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
|| |||||||| ||||| || |||| | ||||| || | || | | ||||||||
Sbjct 52427 TCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCT 52486
Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829
||| |||| | | |||| | | | || ||| || || || |||| ||||| ||
Sbjct 52487 -TGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGT 52545
Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||| |||| ||||| ||||||||||||||
Sbjct 52546 TTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 52578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303283428800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |