Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738615.1_202016-09-
21] 93 sequences; 11,869,123 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq12 132 4e-26
>seq12
Length=996679
Score = 132 bits (146), Expect = 4e-26
Identities = 169/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | |||||| |||||||| || | ||| |||||||| | ||||| || |||
Sbjct 52077 CCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 52136
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | | || || | ||| || || ||||||||||||| ||||||||| | ||
Sbjct 52137 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 52196
Query 43003 ACACCTTCTTTTTCGCTGA--TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGA 43060
| ||||||||| || ||| | ||| |||||| || ||| |||||| || || |
Sbjct 52197 ATACCTTCTTTATC-TTGAATTTTACT-TTTGACGTTGTCAATAGTGTCGGAAGATTCAA 52254
Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| |||| |||||||| || || ||||||||||| || |||||||||||
Sbjct 52255 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 52303
Score = 100 bits (110), Expect = 2e-16
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| ||||||||||| | || ||| || || | || ||||| |||
Sbjct 52305 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 52364
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || | |||| |||| ||| || |||||||| ||||||| |||||||| | ||
Sbjct 52365 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 52424
Query 43003 ACACCTTCTTTTTCGCTGA----TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTC 43058
| |||||| || || ||| || || || || || ||| |||||| || ||
Sbjct 52425 ATACCTTCCTTGTC-TTGAATTTTCGAC---TTAACGTTGTCAATAGTGTCGGAAGATTC 52480
Query 43059 GACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| |||| |||||||| || || || || || || ||||||||||||||
Sbjct 52481 AACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 52531
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || ||||| || | ||| |||||||| | ||||| ||||||
Sbjct 452797 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 452738
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | | || |||||||| || || ||||| ||||||| ||||| || | ||
Sbjct 452737 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 452678
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||| || || |||| ||||| || ||| ||||| || || ||
Sbjct 452677 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 452618
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| | || ||||| || ||||||| ||| || || ||||||||||| ||
Sbjct 452617 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 452568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381369167741394
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |