Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738615.1_202016-09-
21] 93 sequences; 11,869,123 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq9 205 2e-47
seq5 194 4e-44
seq15 116 1e-20
>seq9
Length=421142
Score = 205 bits (226), Expect = 2e-47
Identities = 1071/1680 (64%), Gaps = 47/1680 (3%)
Strand=Plus/Minus
Query 363364 TATGAGAAGGATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTA 363423
|| || | |||| || ||||| |||||||| ||||| ||||| || ||| |
Sbjct 221265 TACGATAGGGATTTCCAGTATACGTATTTCGGATTCAAGACACTGGAGCGTTCGTACTTG 221206
Query 363424 TCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATT 363483
| | || ||||| | | ||||| || |||||| || |||||||||| || |
Sbjct 221205 CTAAGACTGAACGGTGAAGTGGCAGAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTA 221146
Query 363484 GGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT 363543
||||||||| | ||| | || | | | | | || ||||| || | || |
Sbjct 221145 GGTATCCATGGTAGCGATATCGAATCTGTGCTGAAGACTTATAA--TTTGATGTCGTTAA 221088
Query 363544 G-TA-TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGT 363601
| || ||||| ||||| | ||||| | | ||| ||||| || | |||| || ||||
Sbjct 221087 GATACTTCACTCACGCTTCCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGT 221028
Query 363602 CTTCTTGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTT 363660
|||| || |||||| | |||||||| || || ||||| ||||| | ||| || |
Sbjct 221027 CTTCATG-TTTCTTAATTGCCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTG 220969
Query 363661 AAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTT 363720
|| | |||||| | |||||||| | |||||| || ||||| | ||| |||| |
Sbjct 220968 AAAGAATGTGCTATGATTTCCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATC 220909
Query 363721 CGTGC-ACAGAACAGTTACATTCGC-GGCACAGGGGGATACT-CGAATGGGCTGGTTCCC 363777
||| | |||| ||| || ||| || || || |||| | || ||| || ||||
Sbjct 220908 CGTTCCACAGGTTC-TTATAT-CGCTGGTACCAACGG-TACTTCAAACGGGTTGATTCCT 220852
Query 363778 ATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAA 363837
||| ||||||| || | |||||||| | || || ||||||||||| ||| |
Sbjct 220851 ATGATTCGTGTTTTCAATAATACTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCT 220792
Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897
|| || || || | | | ||||| ||||| ||||| || || ||| | || ||
Sbjct 220791 GGTGCTTTCGCCCTTTTCTTGGAGCCATGGCATGCAGATATCTTCGACTTTGTCGATATC 220732
Query 363898 CGGAAAAACACG-GGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGT 363956
| |||||||| || || || ||| | |||||| | ||| ||||| ||| || ||| |
Sbjct 220731 AG-AAAAACACATGGTAAGGAAGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGAT 220673
Query 363957 TTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACA 364016
|||| | ||| ||||| || || | | | | | |||| | | |||| || ||
Sbjct 220672 CCCTGATCTTTTCATGAAACGTGTTCAAGAGGATGGGCCTTGGACTTTATTTTCACC-CA 220614
Query 364017 CGAATGTCC-AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGT 364075
|| || |||| | ||||| |||||||| || | || | ||||| |
Sbjct 220613 GTGCTGCCCCAGGTTTAGATGATGTGTGGGGTGATGAATTTGAAGAACTATATACTCGTT 220554
Query 364076 ATGAATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATC 364134
| ||| || ||| | | | |||| |||||| || || ||| | |||| ||||||
Sbjct 220553 ACGAA----AGAGAAGGTCGTGGTAAAACAATTAAAGCCCAAAAGTTGTGGTATGCCATT 220498
Query 364135 ATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGC 364194
|| | | |||| || ||||| ||||| | ||| | || || || | || ||| |
Sbjct 220497 TTGCAAGCACAGACAGAAACAGGTACACCTTTCATGGTTTATAAGGACGCATGTAACAGG 220438
Query 364195 AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTAT 364253
||| | ||||| ||| || | ||||| || || | | ||| ||||| || || |
Sbjct 220437 AAGACAAACCAACAGAACTTAGGTACTAT-CAAATCATCTAACTTATGTTGTGAAATCGT 220379
Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313
||||| || | || || || ||||| || ||||| | || || || || || || ||
Sbjct 220378 CGAATATTCCTCCCCGGATGAAACTGCAGTTTGTAATTTAGCTTCTATTGCCCTACCAGC 220319
Query 364314 GTTTGT---------AAAAGATGGTACTTTTGACCACCAGCATCTTTA-----TG-ACGT 364358
|| || | ||||||||| || | | || | | || |||
Sbjct 220318 ATTCGTTGAGGTTTCAGAAGATGGTAAAACTGCAAGCTATAATTTCGAGAGATTGCACGA 220259
Query 364359 AAC--CTA---TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCA 364413
| ||| |||| |||| ||| | ||| ||||||||| ||||| ||||||
Sbjct 220258 GATTGCTAAAGTCAT--TACTCACAACTTGAACAGAGTTATCGACCGTAATTACTATCCA 220201
Query 364414 ATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGC 364473
|||| || || ||| |||||| ||| | || |||| ||||||||| ||||||
Sbjct 220200 GTTCCCGAGGCTAGAAATTCAAATATGAAGCATAGACCTATTGCTCTTGGTGTCCAGGGC 220141
Query 364474 CTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTA 364533
| || || || ||||||| | | | ||||| ||| || |||| ||||
Sbjct 220140 TTGGCCGATACTTATATGATGTTGCGTCTACCCTTTGAATCGGAAGAAGCTCAAACTCTA 220081
Query 364534 AATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCA 364593
|| || | ||||| ||||| || || ||| | | || || ||||| |||||
Sbjct 220080 AACAAACAAATCTTCGAAACTATTTACCATGCTACTCTTGAAGCCTCCTGTGAATTGGCC 220021
Query 364594 -AAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCA 364652
|||| |||| ||| || ||||||| ||| || || || ||| |||| | || ||
Sbjct 220020 CAAAAAGAAGGTAAA-TATTCTACTTTTGAAGGTTCTCCAGCTTCCAAGGGTATTTTACA 219962
Query 364653 GTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAA 364712
|| ||| | ||||| | | |||| || | ||| | ||||| || || | |
Sbjct 219961 ATTCGATATGTGGAACGCTAAACCATTTGGCATGTGGGATTGGGAAACCTTAAGAAAGGA 219902
Query 364713 CGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTAC 364772
| || || ||||| | ||||| | || || || ||||| || || || ||
Sbjct 219901 CATTGTTAAACATGGGTTAAGAAACTCTTTGACTATGGCACCAATGCCAACCGCCTCAAC 219842
Query 364773 TGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACG 364832
| | || || || || | || || || |||||||| | || || | || || ||
Sbjct 219841 TTCCCAAATTCTTGGTTATAATGAATGTTTCGAACCAGTGACCTCAAACATGTACTCTCG 219782
Query 364833 CCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGA 364892
|| || || || || ||||| | || |||||| || || | ||| | |||
Sbjct 219781 TCGTGTCCTGTCTGGTGAATTCCAAGTTGTTAATCCATATTTACTACGTGATTTAGTCGA 219722
Query 364893 CCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCA 364952
|| || | |||| ||| || ||||| | ||| | || | ||||||||| | ||
Sbjct 219721 CCTGGGTATTTGGGATGATAGTATGAAACAATATCTAATTACACAAAATGGTTCTATTCA 219662
Query 364953 GAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC 365012
| | ||| | ||| |||| ||||| | ||||||||||| |||||||| ||
Sbjct 219661 AGGCTTACCAAATGTGCCACAAGAATTGAAGGAATTATACAAAACCGTCTGGGAAATCTC 219602
>seq5
Length=557999
Score = 194 bits (214), Expect = 4e-44
Identities = 697/1076 (65%), Gaps = 57/1076 (5%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || |||||| | ||||| ||| |||||| || |||| || || || ||||| |||
Sbjct 293657 TTTACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCT 293716
Query 363607 TGCTTTCTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
|| |||||| | |||||||| || || |||||||| || | ||||| | ||| |
Sbjct 293717 TG-TTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGA 293775
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725
|||||| | |||||||| | ||| || || |||||| || ||||| || ||||| |
Sbjct 293776 ATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTC 293835
Query 363726 ACAGAACAG----TTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATG 363780
| || | ||||||| || ||| || |||| | || || | |||| |||
Sbjct 293836 A----ACTGGTTCTTACATTGCTGGTACAAACGG-TACTTCTAACGGTTTAATTCCTATG 293890
Query 363781 CTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAG 363838
||||||| || | || || || | || || ||||||||||| | |||| | |
Sbjct 293891 ATTCGTGTTTTCAATAACACCGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACC--TG 293948
Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898
| |||||||| | || || || || ||||| ||||| ||||| ||| |||| |
Sbjct 293949 GTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATCTTTGATTTTATTGATATTA 294008
Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958
|||| ||| || ||||||||| | |||||| | ||| ||||| ||| || ||| ||
Sbjct 294009 GGAAGAACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTC 294068
Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACG 364018
|||| | ||| |||||||| || || | | | || ||| || | || | |||
Sbjct 294069 CTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTATTCTCTCCAACAT 294128
Query 364019 AATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATG 364078
| ||| ||| | |||| | |||||||| | || |||||||| || |
Sbjct 294129 CAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCTATATACCCGCTACG 294188
Query 364079 AATCGGAGGGAAAGGC-TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137
| || ||| | | | ||||||| || || || || |||||| | |||| ||
Sbjct 294189 A----GAAAGAAGGTCGTGGTAAGACTATCAAAGCCCAAAAATTATGGTATTCCATTTTG 294244
Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197
|| | || | ||| || || ||||| | | | ||||| ||| | || ||| | ||
Sbjct 294245 GAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAA 294304
Query 364198 TCCAACCAGCAGCACCTTGGT----ACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253
|| || || | || | ||| ||| ||| || ||| |||| || ||| |
Sbjct 294305 TCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCA----AACTTATGCTGTGAAATTGT 294360
Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313
||||||| | ||||| || || ||||| || |||||| | || || | || | || ||
Sbjct 294361 TGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTACCAGC 294420
Query 364314 GT---TTGTAA------AAGATGGT---ACTTTTGACCACCAGCATCTTTATGACGTAAC 364361
| ||| || | |||||| |||| |||| || ||| | | | ||
Sbjct 294421 ATTCATTGAAACTTCTGAGGATGGTAAGACTT----CCACATACAACTTCAAAAAATTAC 294476
Query 364362 CT-ATCATGCT---------ACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATC 364411
| | |||| ||| | ||| | ||| || || || ||||| || |
Sbjct 294477 ATGAAATTGCTAAAGTTGTCACTCGTAATTTAAACAGAGTCATTGATCGTAATTACTACC 294536
Query 364412 CAATTCCTGAAGCCGAG-CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAG 364470
| || |||| |||| || |||||| | ||| | || |||| | | ||||| ||
Sbjct 294537 CTGTTGAAGAAG-CGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTGTTCAA 294595
Query 364471 GGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTT 364530
|| ||||||||| ||| ||| || | || |||||||||| || || ||| |
Sbjct 294596 GGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCCGTTTG 294655
Query 364531 CTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGA 364586
||||||| | ||||||||||| || ||| |||| | ||| ||||| |||||
Sbjct 294656 CTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTGA 294711
>seq15
Length=1051738
Score = 116 bits (128), Expect = 1e-20
Identities = 338/515 (66%), Gaps = 34/515 (7%)
Strand=Plus/Minus
Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-G 111477
||| || |||||||| || |||||||| ||||| | | ||||| || ||| || |
Sbjct 448388 TGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATA-AGATGGGATTCAAAG 448330
Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537
| | ||| ||| ||||| || || ||||| |||||||||||| | || ||||||||
Sbjct 448329 ATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATTTCAATGGAGGCATTTTGGTGCTA 448270
Query 111538 ACTACAAAACCATGC-ACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTC 111596
| ||||| || ||| | ||| ||| | ||| || | ||||||||| | | ||
Sbjct 448269 AATACAAGACG-TGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAGGTT 448211
Query 111597 ATTGATCAAATTAAGAACAA-CCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCC 111655
|| || || | |||| || ||| || | | | || ||||||||||| ||||||||
Sbjct 448210 ATCCATAAACTAAAGACAAATCCCTACGA-TAGAAGAATCATTATGAGTGCCTGGAACCC 448152
Query 111656 AAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATG---- 111711
| || || || |||||||| | || ||||| ||| || | | ||||| ||||
Sbjct 448151 AGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCATATTTTTTCACAGTTCTATGTCAG 448092
Query 111712 --TACACGACG--------GGAT-------------GCTTTCATGCCAAATGTATCAGCG 111748
| | | | | |||| ||||||||| | |||| || ||
Sbjct 448091 TTTCCCCAAAGAAGGAGAAGGATCCGGTAAGCCCCGCCTTTCATGCTTATTGTACCAACG 448032
Query 111749 ATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTG 111808
||| |||||| || | || || || ||||| |||||| || || | | ||| |
Sbjct 448031 TTCTTGTGATATGGGGTTGGGAGTACCATTTAACATTGCATCATATGCTTTGTTGACTAG 447972
Query 111809 CTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGC 111868
| || ||| | || | | | || ||||| |||||||| | | || |||||
Sbjct 447971 AATGATTGCTAAAGTTGTCGACATGGAGCCAGGTGAGTTCATTCATACTTTGGGGGATGC 447912
Query 111869 GCATGTTTACACAAACCACATTGATGCACTTAAAA 111903
|||||||| | | ||||||||||||| ||| |||
Sbjct 447911 ACATGTTTATAAAGACCACATTGATGC-CTTGAAA 447878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303352046972726
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