Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738615.1_202016-09-
21] 93 sequences; 11,869,123 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq12 105 5e-18
seq9 91.5 1e-13
>seq12
Length=996679
Score = 105 bits (116), Expect = 5e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
|||||||||||| | ||| |||||| ||||| || |||||||| || ||| | ||||
Sbjct 52319 CAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 52378
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||| |||||||||||||| |||| || |||||||| | |||| || ||||||||
Sbjct 52379 TTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 52438
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||| || || || | | || || || | || ||||| | || || ||
Sbjct 52439 TTGAATTTTCGACTTAACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 52498
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || |||| || || |||||||| |||||
Sbjct 52499 CTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 52531
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||||||||| || || || || ||||| || ||||||||||| || ||| | ||||
Sbjct 52547 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCAGACAGCGTTCTACCGTC 52606
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|| | ||||||||||||||| |||| || |||||||| | || | || ||||||||
Sbjct 52607 TTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC 52666
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||| || || || | | | || || | || || |||| || || ||
Sbjct 52667 TTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGT 52726
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||| || |||||||| || || |||||||||||
Sbjct 52727 TTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 52759
>seq9
Length=421142
Score = 91.5 bits (100), Expect = 1e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
||||||||||| ||||| ||||| | ||| | |||| ||||| |||||||| |||||
Sbjct 56086 TCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAG 56027
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695
|||| || ||||| || | || | || |||||||| ||||||| || |||
Sbjct 56026 ATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTG 55967
Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755
| | || || || | || || |||| || || || || || |||||||| || |||
Sbjct 55966 TCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACA 55907
Query 48756 AAA 48758
|||
Sbjct 55906 AAA 55904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937168231039
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |