Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738615.1_202016-09-
21] 93 sequences; 11,869,123 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq12 120 2e-22
>seq12
Length=996679
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||||||||| || ||||| |||||||| ||||| ||||| ||
Sbjct 52533 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCAGAC 52592
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| ||||||| || || ||||||||||| || || | ||||| || || ||
Sbjct 52593 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 52652
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||| ||| | |||||| | || || || || ||
Sbjct 52653 ATACCTTCCTTGTCT-TGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 52711
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct 52712 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 52759
Score = 116 bits (128), Expect = 2e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | |||||||||||| | || ||| || |||||||||||||| ||
Sbjct 52305 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 52364
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| ||||||| ||||| ||||||||||| || || | ||||| || || ||
Sbjct 52365 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 52424
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||| ||| | |||||| | ||| ||||| || ||
Sbjct 52425 ATACCTTCCTTGTCT-TGAATTTTCGACTTAACGTTGTCAATAGTGTCGGAAGATTCAAC 52483
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | |||||| || ||||| || | || || |||||||| |||||
Sbjct 52484 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 52531
Score = 104 bits (114), Expect = 1e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| |||||| |||||||||||| || || || || || |||| | ||||| ||||||
Sbjct 51873 TGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGT 51932
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
||||||||||| || || | || ||||| || || | || ||||||||| ||| |||
Sbjct 51933 TTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCT-TGAATTTT 51991
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
|| |||||| | ||| ||||| || || || | |||||| || ||||| ||
Sbjct 51992 TGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGT 52051
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
| || || || ||||| |||||
Sbjct 52052 CAGTGTCTTGACGAAAATTTGCAT 52075
Score = 100 bits (110), Expect = 2e-16
Identities = 163/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || ||||| |||||||| ||||| || || ||
Sbjct 452797 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 452738
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| | ||||| | ||| ||||| ||||| || || | |||||||| || ||
Sbjct 452737 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 452678
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| |||||| | || || | ||| ||||| || ||
Sbjct 452677 ATACCTTCCTTGTCTTGGATCTTG-GACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 452619
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
||||| ||| || || ||||||||||| || || || ||||| ||||| |||
Sbjct 452618 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 452567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729243273669
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |