Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738705.1_202016-09-
21] 414 sequences; 12,499,313 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq12 174 4e-38
seq9 159 8e-34
seq11 158 3e-33
seq2 91.5 4e-13
>seq12
Length=1051949
Score = 174 bits (192), Expect = 4e-38
Identities = 170/219 (78%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| ||||| ||||| ||||||| ||||| |||| ||||||||| ||
Sbjct 493136 TCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 493077
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| ||||| ||||| | || ||||||||| || ||||||||||||||
Sbjct 493076 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 493017
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || || ||||| || | ||| || || | || ||
Sbjct 493016 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAAT 492957
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || ||||| || | ||| | |||||| ||
Sbjct 492956 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 492918
Score = 147 bits (162), Expect = 5e-30
Identities = 153/201 (76%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| ||||| ||||| ||||||| ||||| || | ||| ||||| ||
Sbjct 62798 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 62857
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||||||||||| || || ||||| | | ||||| || || || |||||||||||
Sbjct 62858 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 62917
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||| ||||| || ||| || ||||| ||||| |||| ||| || ||||| |||||
Sbjct 62918 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 62977
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
|| || || |||||||| ||
Sbjct 62978 GGTTTTACCGGTCAAAGTCTT 62998
Score = 145 bits (160), Expect = 2e-29
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558
|||| ||||||||| |||||||| || ||||| | |||||| || | || ||||| |||
Sbjct 62115 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 62174
Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618
|||||||| ||||| || || || || | || ||| ||||| || |||||||||||||||
Sbjct 62175 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 62234
Query 225619 TCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATC 225678
||||| || || ||| || || || ||||| || | ||| || |||| || ||
Sbjct 62235 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 62294
Query 225679 GTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || |||| || || | || | ||||||
Sbjct 62295 GTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 62329
Score = 132 bits (146), Expect = 1e-25
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| ||||| ||||| ||||||| ||||| || | ||| ||||| ||
Sbjct 62342 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 62401
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||||||| ||||| ||||| || || | || ||||| || || || |||||||| ||
Sbjct 62402 ATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTT 62461
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||| ||||| || || || || ||||| || | ||| || |||| || ||
Sbjct 62462 ATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 62521
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || | |||||| | ||| | ||||||
Sbjct 62522 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 62557
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| || || ||||| || | ||||| || || || | |||||||| | || |||||
Sbjct 63024 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 63083
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| |||||||||||||| || || ||||| | || |||||| || || || |||||||||
Sbjct 63084 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 63143
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|||||||| || || ||| || |||||||| || || | ||| || || || ||
Sbjct 63144 TTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTT 63203
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || || |||||||| || | ||| | |||||
Sbjct 63204 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 63241
Score = 107 bits (118), Expect = 5e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| || ||||| || | || ||||| | || ||||| || ||||| || ||||| ||
Sbjct 62589 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 62648
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|| || || | || |||||| || || |||||||||||||||||||| || || ||
Sbjct 62649 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTG 62708
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
|| || || ||||| || | ||| || |||| || || ||||| || || | ||||
Sbjct 62709 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 62768
Query 225697 TTTATGAACACTTGCAT 225713
|| | ||| | ||||||
Sbjct 62769 TTGACGAAAATTTGCAT 62785
>seq9
Length=429256
Score = 159 bits (176), Expect = 8e-34
Identities = 156/201 (78%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| | ||||||||||||||| | ||||| || | ||| ||||| ||
Sbjct 67146 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 67087
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| ||||| ||||| | || ||||||||| || || |||||||||||
Sbjct 67086 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 67027
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| |||||| ||| ||| || || ||||| || | ||| || || || |||||
Sbjct 67026 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 66967
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
||||| || |||||||| ||
Sbjct 66966 GGTCTTACCAGTCAAAGTCTT 66946
>seq11
Length=672989
Score = 158 bits (174), Expect = 3e-33
Identities = 159/207 (77%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | || | ||||||||| ||||||| ||||| || | | |||||| ||
Sbjct 624001 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 624060
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| ||||| ||||| | || ||||||||| || || |||||||||||
Sbjct 624061 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 624120
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || |||||||| || | ||| || || || |||||
Sbjct 624121 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 624180
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704
||||| || |||||||| || | |||
Sbjct 624181 GGTCTTACCAGTCAAAGTCTTAACGAA 624207
>seq2
Length=801368
Score = 91.5 bits (100), Expect = 4e-13
Identities = 80/100 (80%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || |||||||| || || |||||||| || ||||||||
Sbjct 34350 GAAAATTTGACCATCGGTAATGGAAATAACATTGGTTGGAATATAAGCGGAGACATCACC 34291
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCA 4569
|||| ||||| | |||||| || || |||| || |||
Sbjct 34290 ACCTTGGGTTTCAATAACAGGCAAAGCAGTTAAAGAACCA 34251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192524874367316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |