Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738715.1_202016-09-
21] 124 sequences; 11,884,406 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq10 127 2e-24
>seq10
Length=736394
Score = 127 bits (140), Expect = 2e-24
Identities = 532/831 (64%), Gaps = 23/831 (3%)
Strand=Plus/Minus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
||||| || ||| |||||||||||| ||||| || || || || | || || || |||
Sbjct 392156 TTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCCAAGGAGATGTTT 392097
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAAC-AATAGTATTTATCGCATCCCAATTCCAACAA 16062
||||| ||||| |||| |||| || | |||||||| | | || || | | |||
Sbjct 392096 TCCATGAAATC-GAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTACCGAAAGCAACCAA 392038
Query 16063 TAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAA 16122
| ||| || || || || || | || || |||||||||||| |||||| |||| ||
Sbjct 392037 CAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAATCAGCGTTCATACCTAGCAA 391978
Query 16123 TTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTAT 16182
||| || | || || || | ||| ||| || | || || || ||| ||
Sbjct 391977 AGCAACTGGTAAGGCGTCCAAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACAAT 391918
Query 16183 ATCTCTTACTACACTATTTAACGGAGGGTTTAAT----AAGTGTTTAAACATTATACAAG 16238
| || | ||| | | | ||||| | || || |||| | || |
Sbjct 391917 ---TTTTTCAACAATGGCT-GGGTCTGGTTTGTTCTTCAAATGGGCGAACAACAAGCATG 391862
Query 16239 CAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTG 16298
|||| || ||||| |||||||| |||| || || ||||| ||||| || | ||| |
Sbjct 391861 CAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGG 391802
Query 16299 GCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATAC 16358
|||| | |||| ||||| | ||| || || | |||||| ||||| || || || | ||
Sbjct 391801 GCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACAC 391742
Query 16359 CTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatcc 16418
|||||| | |||||| ||||| | || ||||| || | || ||||
Sbjct 391741 CTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGAATCC 391682
Query 16419 attttttagcccaatttgctttttgtttAACACAGTTC----ATGTTCTCTATTGCATTA 16474
|| || |||||| | || | | | || | ||| ||| | | || |||||
Sbjct 391681 ATCTTAAAGCCCATTCGGCCT----TCTCACCGATTTCTGGGATGGTGTGAATGGCATTG 391626
Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534
|| || | | ||||||| || || |||||||| || | || || ||
Sbjct 391625 AACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAACAAGGAGTAAGTT 391566
Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594
|| || |||||||| || || || || ||||| || || | | || || | |||
Sbjct 391565 TCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATT 391506
Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654
|| ||||| | | | || |||| | |||||||| ||||| || || || ||| ||
Sbjct 391505 TGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCG 391446
Query 16655 AAAAACGCAAGTA-TGTGTTTAATAAAAtttttttCGTTATCTGAAAGT---TTTAACCA 16710
||||| ||||| | | || ||| ||| | | ||||| || | | || |||
Sbjct 391445 AAAAAGGCAAGAACTCTG-GAAATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCA 391387
Query 16711 GTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGC 16761
|||| | ||| || || ||||| | ||||| | ||||| ||||||||
Sbjct 391386 GTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAAGC 391336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511283106400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |