Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738715.1_202016-09- 21] 124 sequences; 11,884,406 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq12 192 1e-43 seq11 170 4e-37 seq9 161 2e-34 >seq12 Length=1036560 Score = 192 bits (212), Expect = 1e-43 Identities = 177/223 (79%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || || || || ||||||||||| ||||| || || || || || || Sbjct 51860 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAATCAGACAGCGTTCTACCGTC 51919 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| |||||| ||||| || || | ||||||||| || || || || ||||||||||| Sbjct 51920 TTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC 51979 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 |||||| || | ||| ||| |||||||| || | ||||| |||||||| || ||||| Sbjct 51980 TTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGT 52039 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTATTA 68471 ||| || || | ||||||||||| |||||||| || |||||| Sbjct 52040 TTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT-CTATTA 52081 Score = 178 bits (196), Expect = 2e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||||||||| || || || ||||||||||| || ||||| | || || ||||| Sbjct 481710 CAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 481651 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| |||||||| ||||||||||| Sbjct 481650 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 481591 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | |||||| || || ||||| | ||||| ||||||| ||| || || Sbjct 481590 TTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGT 481531 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||||| || ||||| Sbjct 481530 CTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 481498 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || | ||| || |||||||| ||||| || || || || || || || || ||||| Sbjct 51176 CAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATC 51235 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| || || ||||| || || | |||||| ||||| || ||||| ||||||||||| Sbjct 51236 TTCTAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC 51295 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 |||||| |||| ||| ||| || || ||||| | ||||| || || | ||| || || Sbjct 51296 TTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGT 51355 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || ||||||||||| || ||||| Sbjct 51356 CTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 51388 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| || | ||| |||||||| || ||||||||||| || || || || || || Sbjct 51632 CAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 51691 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| | ||||| ||||| || || | ||||||||| || || ||||| ||||||||||| Sbjct 51692 TTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 51751 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 |||||| || | ||| ||| || || ||||| | ||||| || || | ||| || || Sbjct 51752 TTGAATTTTCGACTTAACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 51811 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || |||||||| || || ||||| Sbjct 51812 CTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 51844 Score = 127 bits (140), Expect = 4e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || || || || ||||||||||| || || || | || || ||||| Sbjct 51404 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATC 51463 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| ||||| || || || || | ||| ||||| || || || || ||||| || || Sbjct 51464 TTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATC 51523 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 |||||| || |||||| || || ||||| | ||||| || || | ||| || || Sbjct 51524 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 51583 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || || |||||||| || ||||| Sbjct 51584 CTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 51616 >seq11 Length=645627 Score = 170 bits (188), Expect = 4e-37 Identities = 160/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| |||| ||||| || ||||||||||| || || || || || || || || Sbjct 617894 CAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTC 617953 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| ||||| || ||||||||||| Sbjct 617954 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 618013 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | |||||| || |||||||| | |||||| |||||||| |||||||| Sbjct 618014 TTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGATTCAACTTCCAAAGTGATGGT 618073 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | ||||| ||||| Sbjct 618074 CTTACCAGTCAAAGTCTTAACGAA 618097 >seq9 Length=441424 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| | ||||| |||||||| ||||| || || || | || || || || Sbjct 71911 CAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTC 71852 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| ||||| || ||||||||||| Sbjct 71851 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 71792 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||||| |||||| || || ||||| | ||||| |||||||| |||||||| Sbjct 71791 TTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 71732 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | |||||||| || Sbjct 71731 CTTACCAGTCAAAGTCTTGACAAA 71708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921620971485280