Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738715.1_202016-09- 21] 124 sequences; 11,884,406 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq12 118 2e-21 seq9 105 2e-17 seq11 98.7 2e-15 >seq12 Length=1036560 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| || | ||| ||||| || |||||||||| ||||||||||| ||| || || Sbjct 51399 AGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTA 51458 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| || ||||| || || || || | | ||| || |||||| || |||||| Sbjct 51459 CCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCT 51518 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || ||||| || || ||| || | ||||| | | ||| || || | || Sbjct 51519 TTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTT 51578 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || |||||||| || |||||||| Sbjct 51579 ATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTG 51613 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474 |||| ||| ||||| ||||| ||||||||||| | |||||||| | || || || ||| Sbjct 51174 CTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 51233 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 ||||| || || || ||||| ||||| | | |||||||| ||| ||| ||||| Sbjct 51234 TCTTCTAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 51293 Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594 || ||||| ||| ||| ||| || | ||||| | | ||| || || | || || Sbjct 51294 TCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 51353 Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || || || || || |||||||| Sbjct 51354 GTCTTACCTGTCAGTGTCTTGACGAAAATTTG 51385 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| | | ||||| || || ||||| ||||||||||| || |||||| |||| |||||| Sbjct 481619 AAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACA 481678 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024 |||| || || |||||||| ||| | || |||||| Sbjct 481679 TCCAAAAGGAATCTACTCTACACTTGGTCTTGAGA 481713 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || ||||| || || | ||| || |||| || || || || |||||||| ||||| ||| Sbjct 51648 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 51707 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 || ||||| | | || || || ||| ||| ||||| || ||||| || ||| Sbjct 51708 GCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 51767 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| || | ||||| | | ||| || || | || || |||||||| || || || Sbjct 51768 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTC 51827 Query 199613 TTCACAAAAATTTG 199626 || ||||||||||| Sbjct 51828 TTGACAAAAATTTG 51841 >seq9 Length=441424 Score = 105 bits (116), Expect = 2e-17 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| | ||| || || ||||| | ||||||||||| ||| || || || Sbjct 71914 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 71855 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||||| || || ||||| | | || ||||| || || ||||| Sbjct 71854 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 71795 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||||||| ||| || || | ||||| | | ||| || ||||| ||||| Sbjct 71794 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 71735 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621 |||||||| || | ||| || |||||| Sbjct 71734 GGTCTTACCAGTCAAAGTCTTGACAAAA 71707 >seq11 Length=645627 Score = 98.7 bits (108), Expect = 2e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | || | ||| || |||||||||| ||||||||||| | ||| || || Sbjct 617891 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 617950 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||||| || || ||||| | | || ||||| || || ||||| Sbjct 617951 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 618010 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| ||| || || | |||||| | || ||| || ||||| ||||| Sbjct 618011 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGATTCAACTTCCAAAGTGAT 618070 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAA 199620 |||||||| || | ||| || || || Sbjct 618071 GGTCTTACCAGTCAAAGTCTTAACGAA 618097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178919726988308