Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738725.1_202016-09- 21] 395 sequences; 12,167,973 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq12 122 7e-23 seq250 96.9 3e-15 >seq12 Length=1058395 Score = 122 bits (134), Expect = 7e-23 Identities = 166/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || | ||| || ||||| || ||||| || ||||| |||||||||||||||| Sbjct 62874 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGA 62933 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || || |||| || |||||||||||| | | || || | || ||||| || Sbjct 62934 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 62993 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676 | || ||||||||| ||||||| ||| | | | || |||||||||| ||| || Sbjct 62994 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCG--ATGGTATCGGAAGATTCA 63051 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | |||||||||||||||||| | ||| || || ||||||||||| Sbjct 63052 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 63101 >seq250 Length=447 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 48511 CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC 48570 ||||| ||| | ||| | ||| |||||| |||||||||||||||| || || | Sbjct 103 CCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACC 162 Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630 ||| || |||||||||||| | | || || | || ||||| || | || |||||| Sbjct 163 GTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTT 222 Query 48631 GTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTAT 48690 |||| |||||| ||| | | || || |||| || || ||| | || || Sbjct 223 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 282 Query 48691 GGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||||||||||| | ||| || ||||| |||||||| Sbjct 283 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421249172070395