Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738725.1_202016-09- 21] 395 sequences; 12,167,973 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq12 170 4e-37 seq9 158 3e-33 seq11 150 4e-31 seq250 140 7e-28 >seq12 Length=1058395 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | || | || |||||||| ||||| || ||||| | || || Sbjct 62652 TCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGT 62711 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| || |||||||| || || || | || |||||| ||||||||||| || Sbjct 62712 TCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACC 62771 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||||||||| |||||||| ||||| ||||| ||| ||| || || || Sbjct 62772 TTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAG 62831 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | ||||| ||||| | |||||| ||||| | |||||| Sbjct 62832 GGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 62873 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||||||||| || || || ||||| |||||||| | || || Sbjct 62880 TCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGCGT 62939 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| ||||||||||| || ||||| | || |||||| |||||||| || || Sbjct 62940 TCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACC 62999 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||||||||| ||| ||||| || ||||| || ||| ||| ||||| | Sbjct 63000 TTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAA 63059 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || |||||||| || ||||| | ||||| Sbjct 63060 TGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 63101 >seq9 Length=438672 Score = 158 bits (174), Expect = 3e-33 Identities = 165/214 (77%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | |||||| || | ||| | |||||| ||||||||||| ||||| || | |||| | Sbjct 73277 TCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-G 73219 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| || ||||| | |||||||| || ||||| | || ||||||||| || || || | Sbjct 73218 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATAC 73159 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| ||||||||||| ||| |||||| || ||||| ||||| ||| ||| ||||| | Sbjct 73158 CTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 73099 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | ||||| || |||||||| || || || Sbjct 73098 AAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 73065 >seq11 Length=650228 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | || | |||||| || ||||| || ||||| || | ||||| Sbjct 622870 TCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGT 622929 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | |||||||| || ||||| | || ||||||||| || || || || Sbjct 622930 TCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACC 622989 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| || || |||||| || ||||||||||| ||| ||| ||||| | Sbjct 622990 TTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAA 623049 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | ||||| || |||||||| || ||||| Sbjct 623050 AGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 623082 >seq250 Length=447 Score = 140 bits (154), Expect = 7e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || || | ||||| || | |||||||| || ||||| |||||||| | || || Sbjct 97 TCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGT 156 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| ||||||||||| || ||||| | || |||||| |||||||| || || Sbjct 157 TCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACC 216 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| || ||||| ||| ||||| || || ||||| || ||| || || | Sbjct 217 TTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAA 276 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || |||||||| || || || | ||||| Sbjct 277 AGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 318 Score = 100 bits (110), Expect = 6e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || || | ||||| || | |||||||| || ||||| |||||||| | || || Sbjct 325 TCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGT 384 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| ||||||||||| || ||||| | || |||||| |||||||| || || Sbjct 385 TCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACC 444 Query 195039 TTC 195041 ||| Sbjct 445 TTC 447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109475984982965