Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738725.1_202016-09-
21] 395 sequences; 12,167,973 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq12 149 1e-30
seq11 147 4e-30
seq9 145 1e-29
seq250 118 2e-21
seq10 116 7e-21
>seq12
Length=1058395
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || ||||| || |||| |||||| ||| ||||||||
Sbjct 62644 ATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCA 62703
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | || |||| |||| ||| ||||| |||||||| ||||| ||||| || ||
Sbjct 62704 GACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGA 62763
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| |||||| |||| || || ||||| || || |||||
Sbjct 62764 GGAATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCA 62823
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| ||||| || || || || || |||| ||||| | ||| || |||||
Sbjct 62824 ACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 62873
Score = 143 bits (158), Expect = 5e-29
Identities = 175/239 (73%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || || |||| ||||| || || || ||
Sbjct 494660 TTCTTACCACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTG 494601
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || | || |||||||| ||||||||||| || ||||| ||||||
Sbjct 494600 TAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGG 494541
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || ||||| || ||||| || || || ||||| ||||| || ||
Sbjct 494540 TCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAA 494481
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| ||||| || ||||| || ||||| ||||| || || | ||| || ||||| ||
Sbjct 494480 GATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 494422
Score = 113 bits (124), Expect = 8e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || || || | ||||| || || ||| || |||||
Sbjct 62872 ATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCA 62931
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | || |||| || | || ||||| ||||| || ||||| ||||| || ||
Sbjct 62932 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 62991
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| ||||| || || || || ||||| || |||||
Sbjct 62992 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 63051
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | || ||||||||||| || || || || | ||| ||||||||
Sbjct 63052 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 63101
>seq11
Length=650228
Score = 147 bits (162), Expect = 4e-30
Identities = 167/224 (75%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || || || ||||||||||| | || || || || ||
Sbjct 622859 ATGATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAG 622918
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| |||| || || |||| |||||||| ||||||||||| || ||||| |||||||||
Sbjct 622919 TCAGATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 622978
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| || ||||| || || || ||||| || || || || |||
Sbjct 622979 GGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGAT 623038
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060
|| ||||| | ||| ||||| |||||||| || || |||| |||
Sbjct 623039 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 623082
>seq9
Length=438672
Score = 145 bits (160), Expect = 1e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || || ||||| || ||||| | ||||| ||| || ||
Sbjct 73288 ATGATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAG 73229
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| || || | || |||| |||||||| ||||||||||| || ||||| |||||||||
Sbjct 73228 TCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 73169
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| || ||||| || || || ||||| ||||| || || |||
Sbjct 73168 GGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGAT 73109
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054
|| ||||| | ||| ||||| |||||||| || || ||
Sbjct 73108 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTT 73071
>seq250
Length=447
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| || | || || | |||||| || | ||| || ||| || |||||
Sbjct 89 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 148
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | || |||| || | || ||||| ||||| || ||||| ||||| || ||
Sbjct 149 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 208
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || || || ||||| || || ||| || || || || |||||
Sbjct 209 GGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCA 268
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| |||| ||| ||||||||||| || || || |||| || ||||||||
Sbjct 269 ACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 318
>seq10
Length=744521
Score = 116 bits (128), Expect = 7e-21
Identities = 334/505 (66%), Gaps = 13/505 (3%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| ||||||||| | |||||||| ||||| || || || | || || ||
Sbjct 389074 TTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTT 389015
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATAT-AA 38950
| ||| ||||| || || |||| | || || ||||| | | || | | | | ||
Sbjct 389014 TCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT-TGTTACCGAAAGCGACCAA 388956
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
| ||| ||||| || || ||||| ||||| |||||| ||| |||||||| | ||
Sbjct 388955 CAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAA 388896
Query 39011 TTTAAATGGTAATGCATCATCAATAAAT-TCttt-ttctatttctacagcttgtttaatt 39068
|| |||||| || || ||| || | ||||| ||| ||||| ||||| | | |
Sbjct 388895 AGCAACTGGTAAGGCGTC--CAAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACA 388838
Query 39069 atcataattatattattttttgataa--tttatatttaatatgattcgcatataGTAAAC 39126
|| | || | || | | | ||| | || | ||| || | | || |
Sbjct 388837 ATTTT--TTCAACGATGGCTGGGTCTGGTTTGTTCTTCAAATGG---GCGAACAACAAGC 388783
Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186
||||||| || || || ||||||||||| ||| | || ||||| || ||| ||||| |
Sbjct 388782 ATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAAC 388723
Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 39246
| ||||| | ||||||||||| | ||| || || || ||||| || || || || |
Sbjct 388722 CGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGA 388663
Query 39247 TACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAA 39306
||| || | | ||||| || | || |||| | ||||||| | | | ||| ||
Sbjct 388662 CACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGAA 388603
Query 39307 TCCAATTTATGGCCCAATCTGCTTT 39331
|||| ||| ||||| || || ||
Sbjct 388602 TCCATCTTAAAGCCCATTCGGCCTT 388578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905131530891000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |