Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738725.1_202016-09-
21] 395 sequences; 12,167,973 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq12 149 5e-31
seq9 131 1e-25
seq11 109 4e-19
seq250 98.7 8e-16
>seq12
Length=1058395
Score = 149 bits (164), Expect = 5e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||||||| | ||| || ||||| |||||||||||||| |
Sbjct 62647 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 62706
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || ||||| || || ||| | ||||||||||| ||||| || |||
Sbjct 62707 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 62766
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || |||||||| | ||| |||||| | || | |||||| ||| ||| ||
Sbjct 62767 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 62826
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || |||||||| || || |||| ||||| || || || |||||
Sbjct 62827 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 62873
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || || || ||||| ||||| ||||| || || |
Sbjct 494651 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 494592
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || | ||| || |||||| | ||||||||||| || || || |||
Sbjct 494591 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 494532
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || |||||||| | || |||||| | || | |||||||||| ||| |||
Sbjct 494531 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 494472
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| || || ||||| || || ||||| || || || || || ||||| ||
Sbjct 494471 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 494422
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || |||||| ||||| || ||||| || |||||||| ||||| |
Sbjct 62875 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 62934
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || || || || || ||| | ||||||||||| ||||| || ||
Sbjct 62935 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 62994
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| |||||| | || || | || | || || ||| ||| ||
Sbjct 62995 ATACCTTCCTTGTCTTG-AATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 63053
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| | ||||| ||||| || || || || || || || ||||||||
Sbjct 63054 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 63101
>seq9
Length=438672
Score = 131 bits (144), Expect = 1e-25
Identities = 162/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || || || || | |||||||||||||||||||| || || |
Sbjct 73282 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 73223
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | || || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 73222 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 73163
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| ||| |||| |||||| | || | |||||||||| ||| ||
Sbjct 73162 ATACCTTCCTTGTCTTG-AATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 73104
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
||| | ||| || || || ||||| || || || |||||
Sbjct 73103 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 73065
>seq11
Length=650228
Score = 109 bits (120), Expect = 4e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || || || | || |||||||| | |||||||| ||||| ||||| || || |
Sbjct 622865 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 622924
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 622925 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 622984
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || |||||||| | || |||||| | || | ||||||||| ||| |||
Sbjct 622985 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 623044
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
|| | ||| || || || ||||| || || ||||| ||
Sbjct 623045 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 623082
>seq250
Length=447
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
||||| | ||| | ||||| || || |||||||| ||||| | | || | | ||
Sbjct 107 AGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCT 166
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| || || || || ||| | ||||||||||| ||||| || || ||||| || |||||
Sbjct 167 TCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCC 226
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | ||| || || | || | ||||| || ||| || || | ||| || |||
Sbjct 227 TGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTT 286
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || |||||||| ||||||||
Sbjct 287 TTACCGGTCAAAGTCTTAACAAAGATCTGCAT 318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385217345530695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |