Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738835.1_202016-09- 21] 725 sequences; 12,492,134 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq301 84.2 1e-11 seq12 84.2 1e-11 >seq301 Length=506 Score = 84.2 bits (92), Expect = 1e-11 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234 |||| ||||| ||| | |||| ||| || || ||||||||||| |||| | || Sbjct 292 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCG 351 Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCT 34292 || || | |||||| || || || || | || ||| || || || || || || |||| Sbjct 352 TCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATAC-CT-TCCT 409 Query 34293 TGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGA 34352 |||| || || ||| | | | |||| |||| ||||| || || | |||| Sbjct 410 TGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGA 469 Query 34353 TGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||||| ||||| | ||| || |||||||||||||| Sbjct 470 TGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 506 >seq12 Length=1059086 Score = 84.2 bits (92), Expect = 1e-11 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234 |||| ||||| ||| | |||| ||| || || ||||||||||| |||| | || Sbjct 64432 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCG 64491 Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCT 34292 || || | |||||| || || || || | || ||| || || || || || || |||| Sbjct 64492 TCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATAC-CT-TCCT 64549 Query 34293 TGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGA 34352 |||| || || ||| | | | |||| |||| ||||| || || | |||| Sbjct 64550 TGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGA 64609 Query 34353 TGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||||| ||||| | ||| || |||||||||||||| Sbjct 64610 TGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 64646 Score = 84.2 bits (92), Expect = 1e-11 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234 |||| ||||| ||| | |||| ||| || || ||||||||||| |||| | || Sbjct 65158 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCG 65217 Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCT 34292 || || | |||||| || || || || | || ||| || || || || || || |||| Sbjct 65218 TCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATAC-CT-TCCT 65275 Query 34293 TGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGA 34352 |||| || || ||| | | | |||| |||| ||||| || || | |||| Sbjct 65276 TGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGA 65335 Query 34353 TGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||||| ||||| | ||| || |||||||||||||| Sbjct 65336 TGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 65372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323069145356000