Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738835.1_202016-09- 21] 725 sequences; 12,492,134 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq5 109 5e-19 seq9 87.8 2e-12 >seq5 Length=567499 Score = 109 bits (120), Expect = 5e-19 Identities = 288/437 (66%), Gaps = 7/437 (2%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| | || || ||||||| || || || || || || ||||| || |||||| || Sbjct 303769 GCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTG 303828 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | | | |||| ||||| ||| || |||| ||||| | | ||||| ||||| Sbjct 303829 GTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTG 303888 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 || || ||| || || || || || | | |||| || | ||| | | ||||| Sbjct 303889 ATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCT 303948 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| ||||| || || || || ||||| | | |||||| | || || ||||| Sbjct 303949 TACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAAT 304008 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || || || || |||||||||||| | ||| ||| | || || | || Sbjct 304009 AACACTGCCCGTTATGTTGACCAGGGTGGTAACAAGAGACCTGGTGCGTTTGCCCTTTAC 304068 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 || || || ||||| || || | | ||| || || | | ||||||||||| || Sbjct 304069 CTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGGTAAA 304128 Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || ||| | | || ||||| | ||| ||||| ||| | || || ||||| ||| Sbjct 304129 GA---GGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATG 304185 Query 94309 AAACGCGTCG-AGAAAA 94324 || || |||| |||||| Sbjct 304186 AAGCGTGTCGAAGAAAA 304202 >seq9 Length=450638 Score = 87.8 bits (96), Expect = 2e-12 Identities = 209/316 (66%), Gaps = 0/316 (0%) Strand=Plus/Minus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| || | |||||||| || || || || || |||||||| |||||| | || Sbjct 248617 CCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATGTTTCTTAATTG 248558 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | | |||| ||||| ||| || |||| || | | || || ||||| | || | Sbjct 248557 CCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTT 248498 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075 | ||| || || || | || | | || || || | ||| ||| ||||| || | Sbjct 248497 CCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTCTTATA 248438 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 || |||||||| || || || ||||| | | |||||| | || || ||||| || Sbjct 248437 TCGCTGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATA 248378 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195 | || || || ||||||||||||||| | ||| ||| ||||||| | | | | Sbjct 248377 CTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGG 248318 Query 94196 AGCCCTGGCACGCGGA 94211 |||| ||||| || || Sbjct 248317 AGCCATGGCATGCAGA 248302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494718716571000