Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738835.1_202016-09- 21] 725 sequences; 12,492,134 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq12 149 1e-30 seq11 145 2e-29 seq9 143 5e-29 seq301 122 2e-22 seq10 89.7 1e-12 >seq12 Length=1059086 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | || || ||||| || |||| |||||| || ||||||||| Sbjct 64830 ATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCA 64889 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| | || |||| ||| ||||||||||| || |||||||||||||| || Sbjct 64890 GACAGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGA 64949 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| || ||| |||| || || |||| || || ||||| Sbjct 64950 GGGATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCA 65009 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || ||||| || || || || || |||| ||||| | || || ||||| Sbjct 65010 ACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 65059 Score = 138 bits (152), Expect = 2e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || || |||| ||||| || || ||| || || || || Sbjct 494874 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 494815 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| |||| |||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct 494814 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 494755 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || ||||| || ||||| || || || ||||| |||| || || ||||| || Sbjct 494754 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 494695 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||| || ||||| || ||||| ||||| || || | || || ||||| || Sbjct 494694 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 494644 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | || || || || | ||||| || || ||| || || ||| Sbjct 64417 ATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA 64476 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || |||| | || || | || ||||| |||||||| || ||||||||||| || Sbjct 64477 GACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGA 64536 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || ||||| || || ||| || | || || ||||| Sbjct 64537 GGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCA 64596 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || |||| ||| ||||||||||| || || || |||| ||| |||||||| Sbjct 64597 ACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 64646 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | || || || || | ||||| || || ||| || || ||| Sbjct 65143 ATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA 65202 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || |||| | || || | || ||||| |||||||| || ||||||||||| || Sbjct 65203 GACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGA 65262 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || ||||| || || ||| || | || || ||||| Sbjct 65263 GGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCA 65322 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || |||| ||| ||||||||||| || || || |||| ||| |||||||| Sbjct 65323 ACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 65372 Score = 120 bits (132), Expect = 6e-22 Identities = 171/240 (71%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| || | || || | |||||| || | ||| || || || |||||| Sbjct 65371 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 65430 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| | || || | || ||||| |||||||| ||||| |||||||| || Sbjct 65431 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 65490 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| ||||| || || || || | ||| || ||||| Sbjct 65491 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 65550 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT--TTTATTAG 192544 ||||| | || ||||||||||| || || || || | || |||||||| | |||||| Sbjct 65551 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 65610 Score = 118 bits (130), Expect = 2e-21 Identities = 131/175 (75%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 192362 AATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGAT 192421 ||||||| | |||| | || |||| ||| ||||||||||| || ||||||||||||| Sbjct 64657 AATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTCTGTTGAT 64716 Query 192422 CAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACG 192481 | || || || |||||||||||||| || ||| |||| || || |||| || || | Sbjct 64717 CCGGAGGGATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAG 64776 Query 192482 ATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||| || ||||| || || || || || |||| ||||| | || || ||||| Sbjct 64777 ATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 64831 >seq11 Length=653068 Score = 145 bits (160), Expect = 2e-29 Identities = 167/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||| ||||||||||| | | || || ||||||||||| | || || ||| | Sbjct 625741 GTTCAATGATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGT 625800 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | || ||||||| |||| | || |||||||| |||||||||||||| ||||| |||| Sbjct 625801 TGTAGTCAGATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTT 625860 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 | |||||||| || ||||| || ||||| || || || ||||| || | || | Sbjct 625861 GGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAG 625920 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 192523 | ||||| ||||| | ||| ||||| |||||||| || || |||| Sbjct 625921 AAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAA 625965 >seq9 Length=450638 Score = 143 bits (158), Expect = 5e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||| ||||||||||| | | || ||||| || ||||| | ||||| || | Sbjct 79272 GTTCAATGATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGT 79213 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | || ||||| || |||| | || |||||||| |||||||||||||| ||||| |||| Sbjct 79212 TGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTT 79153 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 | |||||||| || ||||| || ||||| || || || ||||| |||| || | Sbjct 79152 GGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAG 79093 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527 | ||||| ||||| | ||| ||||| |||||||| || || || | ||| Sbjct 79092 AAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 79044 >seq301 Length=506 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | || || || || | ||||| || || ||| || || ||| Sbjct 49 ATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA 108 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || |||| | || |||| ||| ||||| ||||| || ||||| |||||||| || Sbjct 109 GACAAGGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGA 168 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| |||||| |||| || || |||| || || ||||| Sbjct 169 GGAATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCA 228 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || ||||| || || || || || |||| ||||| | || || ||||| Sbjct 229 ACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 278 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | || || || || | ||||| || || ||| || || ||| Sbjct 277 ATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA 336 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || |||| | || || | || ||||| |||||||| || ||||||||||| || Sbjct 337 GACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGA 396 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || ||||| || || ||| || | || || ||||| Sbjct 397 GGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCA 456 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || |||| ||| ||||||||||| || || || |||| ||| |||||||| Sbjct 457 ACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 506 >seq10 Length=735747 Score = 89.7 bits (98), Expect = 1e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 49821 AAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTT 49880 || |||||||| || || || ||||| ||||| ||| | || ||||| || ||| ||| Sbjct 392975 AAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTT 392916 Query 49881 AATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAG 49940 || || ||||| | ||||||||||| | ||| || || || ||||| || || || Sbjct 392915 AAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAA 392856 Query 49941 AATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCT 50000 || | ||| || | | ||||| || | || |||| | ||||||| | | | ||| Sbjct 392855 AAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCT 392796 Query 50001 AATATCCAATTTATAGCCCAATCTGCTTT 50029 ||||| ||| |||||| || || || Sbjct 392795 TGAATCCATCTTAAAGCCCATTCGGCCTT 392767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984470855103750