Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738835.1_202016-09-
21] 725 sequences; 12,492,134 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq5 132 1e-25
seq9 118 3e-21
seq4 95.1 3e-14
>seq5
Length=567499
Score = 132 bits (146), Expect = 1e-25
Identities = 555/866 (64%), Gaps = 20/866 (2%)
Strand=Plus/Plus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
||||||||||| |||||| | |||||| |||||||||| | |||| || | ||
Sbjct 303601 TATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAAGTCGCC 303660
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
|||||||| ||||| | || | | || || | || || || || | ||||| |
Sbjct 303661 GAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAAAGATATCGAG 303720
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483
|||| | | ||| ||| | | | | ||| | || ||| || |||| ||
Sbjct 303721 GCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCTCCAACG 303780
Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTAA 110542
| || || || || ||| | ||| || | ||||| |||||| | | || ||
Sbjct 303781 TTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTG-TTTCTTGGTTGCCATGAA 303839
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602
|| || ||||| || || ||||| || | | || ||| |||| | ||||| ||||
Sbjct 303840 GGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAAC 303899
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662
|||| || |||||| | || | ||| | ||||| |||| || | | || ||
Sbjct 303900 TGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGG 303959
Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722
| || ||| |||| | || | |||| ||| | | || ||||| |||||||
Sbjct 303960 TACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAATAACACTGCCCG 304019
Query 110723 ATATGTGAATCAAGGTGGTAA---GAGAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779
||||| | || |||||||| |||| ||| | ||||| | || || ||||| ||
Sbjct 304020 TTATGTTGACCAGGGTGGTAACAAGAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATG 304079
Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA- 110838
|||| | ||||||||||| || | || || | || || || || | |||| |||
Sbjct 304080 GCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGG---TAAAGAGGAAAT 304136
Query 110839 --GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896
| ||| | ||||| || ||| | |||||| | ||| | |||||||| ||||| |
Sbjct 304137 TCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGA 304196
Query 110897 AGAAAATGGCATGTGGTCTCTTATGTGTCC-TCATCGTTCTCCTGGTCTATCTGATGTAT 110955
||||||||| | ||| | | | | ||| |||| |||||||| || ||| |
Sbjct 304197 AGAAAATGGGACCTGGACATTATTCTCTCCAACATC-AGCTCCTGGTTTAAGCGATTGTT 304255
Query 110956 ATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG-CAAGTTTCG-CAA 111013
| || | |||||||| | || || || || |||||||| | | | | | |
Sbjct 304256 ACGGTGACGAGTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCGTGGTAAGACTA 304315
Query 111014 ACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAAC 111073
||| ||| ||| || | |||| || | ||| | ||| ||||||||| ||
Sbjct 304316 TCAA-----AGCCCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTAC 304370
Query 111074 TCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAAC 111133
|||| || | || || ||| | ||| | ||||||||||||| || |||||
Sbjct 304371 ACCTTTCGTTGTTTACAAGGATGCTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGT 304430
Query 111134 AATTAAGTCTAGTAATTTGTGCTGTG 111159
|| ||||| || || |||||||
Sbjct 304431 CATCAAGTCATCAAACTTATGCTGTG 304456
>seq9
Length=450638
Score = 118 bits (130), Expect = 3e-21
Identities = 394/607 (65%), Gaps = 7/607 (1%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
||||| || ||||| || || || ||| | || || || | | || || || |
Sbjct 248789 TATTTCGGATTCAAGACACTGGAGCGTTCGTACTTGCTAAGACTGAACGGTGAAGTGGCA 248730
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||||||||||| || || | | ||||| ||| | ||||| ||||| ||||| ||
Sbjct 248729 GAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTAGGTATCCATGGTAGCGATATCGAA 248670
Query 110424 GCTGTTATTGAATGTTATGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTAC 110482
|||| | | |||| || | || || || | | | | ||| ||| | || ||
Sbjct 248669 TCTGTGCTGAAGACTTATAATTTGATGTCGTTAAGATACTTC-ACTCACGCTTCCCCAAC 248611
Query 110483 CCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTA 110541
|||| ||||| || || ||| || |||| || |||||| | | || |
Sbjct 248610 TTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATG-TTTCTTAATTGCCATGA 248552
Query 110542 ACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAA 110601
| ||||| ||||| ||||||||||||||| || | |||||| |||| | ||||| ||||
Sbjct 248551 AGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAAA 248492
Query 110602 ACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA 110661
| || || ||||| |||| | | | || || || | ||| | |||||||
Sbjct 248491 CTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTCTTATATCGCTG 248432
Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721
| || ||| |||||| || | |||| ||| | | || ||||| | |||||
Sbjct 248431 GTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATACTGCCC 248372
Query 110722 AATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTT 110778
|||||| | || |||||| |||||| ||| | || || | | | || || |
Sbjct 248371 GTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGGAGCCAT 248312
Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838
||||| ||||||| || || || | || | | |||| || || ||||||
Sbjct 248311 GGCATGCAGATATCTTCGACTTTGTCGATATCAGAAAAACACATGGTAAGGAAGAAATTC 248252
Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898
| ||| | ||||| || ||| | ||||| | ||| | |||||||||||||||||||
Sbjct 248251 GTGCAAGAGATTTGTTCCCTGCTCTATGGATCCCTGATCTTTTCATGAAACGTGTTCAAG 248192
Query 110899 AAAATGG 110905
| ||||
Sbjct 248191 AGGATGG 248185
>seq4
Length=1485087
Score = 95.1 bits (104), Expect = 3e-14
Identities = 127/175 (73%), Gaps = 4/175 (2%)
Strand=Plus/Minus
Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGG--AATTATGCAGGCAT 304943
||||||| |||| |||| || | ||||||||||| |||||||| || | || ||
Sbjct 212094 TTACAATTTCATGTTGCCACTTATATGGATAATGATATTGCTGGTCAACCA--CAAGCTC 212037
Query 304944 CTCAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTC 305003
||||| || ||| | || | || |||| | || | || |||||||||||||
Sbjct 212036 TTCAAAAGTCCGGCCGTCCCGTTAAATCTATTCGTGCTCGTTTGAAGGGTAAAGAGGGTC 211977
Query 305004 GTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAAT 305058
|||| |||||||| ||||||| || ||||| |||||| ||||||| ||| ||
Sbjct 211976 GTATCAGAGGTAATTTAATGGGTAAGCGTGTGGATTTTTCGGCAAGAACTGTTAT 211922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186801775621725
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |